Clarias gariepinus (North African catfish): 128520646
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Entry
128520646 CDS
T10780
Symbol
tlr18
Name
(RefSeq) toll-like receptor 18
KO
K10159
toll-like receptor 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04145
Phagosome
cgar04620
Toll-like receptor signaling pathway
cgar05132
Salmonella infection
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128520646 (tlr18)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128520646 (tlr18)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128520646 (tlr18)
09171 Infectious disease: bacterial
05132 Salmonella infection
128520646 (tlr18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128520646 (tlr18)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128520646 (tlr18)
04054 Pattern recognition receptors [BR:
cgar04054
]
128520646 (tlr18)
04090 CD molecules [BR:
cgar04090
]
128520646 (tlr18)
00536 Glycosaminoglycan binding proteins [BR:
cgar00536
]
128520646 (tlr18)
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Phagocytosis
Toll-like receptors
128520646 (tlr18)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of breast milk
128520646 (tlr18)
Pattern recognition receptors [BR:
cgar04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
128520646 (tlr18)
CD molecules [BR:
cgar04090
]
Proteins
128520646 (tlr18)
Glycosaminoglycan binding proteins [BR:
cgar00536
]
Hyaluronan
Cell surface receptors
128520646 (tlr18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
128520646
NCBI-ProteinID:
XP_053350949
LinkDB
All DBs
Position
4:complement(18566052..18571675)
Genome browser
AA seq
848 aa
AA seq
DB search
MQMADVRAFTLFRLMIGFQASLLILPFKAEQSCLISADQRTADCRGQRLERVPVEELPSS
LEMLDLSYNILQVIKNDDFIKLPLLNVLWLQFNNISLIEDEAFHKNLLLEEVNMFNNSMT
SIPSKAIAPLSRLKVLEMANNLYTGATLDDVFLNFKSLKLLSLGGPVLCSLKKGDLDMLT
DISLERIAIKTSSTLDVYDPGYLKNIQTANLWLQIAIDNSTHMLPLILKDLEHKTFKAIR
FRNLFEFRYYTDTEDIFYGLQYINTQELTFHNGKFNEDLLRMALVNLEKSEIKSLGLFFI
DFARSQEFVNSEEGSSMTNLVLDMLVLSDISNPEILTFDWSFTWLNKIRHLQINNVNFNF
VPCDAWEEMKEVEILDLSNNRLKDNFLFNQQCDYTDTMLGLHTFNLSNNKLTSLSNFAFL
AGEFRHLRVIDISYNHFGFKGNSPCFWKPNITTVVANHNSMVFDSFKCLPTTVLYLDLSY
CNIDQLDVNYFRKAVHLREVYLSGNKIKFIPSDWKSPSIRSLALDGNSFGIISMRSFMGL
PNLEQLRAGNNPYHCTCELHNFIKQTELKGKVNITDWPENYRCYHPEALLNTMVSNYLPA
HIVCDIRLVIVISVVTTVGAVLALIIICYICNIPWYAKATYQIVRAKYRSHKEGLALSAD
YMFHAFISYSHSDADWVRDELLPCLENSKPPYRLCIHERDFIPGKWIIDNIIENIENSRK
VIFVLSQNFVNSEWCNYELYFAQQRAMGKTFSDVILVVKEPIDPNSLPSKYCKLKKMLSN
KTYLEWPEQSKHQAFFWAQLRSVMGKPNHTQQSSASLRRHSTRMNTVSVIELAQEHQKIA
DSGQKIAS
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatggcagatgtgagagcgtttactttgttcaggctcatgattggctttcaagca
tccctcctcatcttaccatttaaagctgaacaatcctgtcttatatctgctgaccagcgc
acggcagactgccggggccagcgcctggagcgagtgcctgtggaggaacttccttcatcc
ctagagatgctagatctttcctataacattctacaggttatcaaaaatgatgattttatt
aagctgcctctccttaatgtcctatggcttcaatttaacaatatatccttgattgaggat
gaagcctttcataaaaatctgctactggaggaagtaaatatgtttaataactcaatgact
tctattccatcaaaagcaatcgccccactgagcaggttgaaagttttagagatggcaaat
aatctctatactggggcaacactggatgatgtttttttgaatttcaagagtctaaaacta
ttgtctttgggtggtcctgtactctgcagtttgaaaaagggtgaccttgatatgttaacg
gacatatctctggagaggattgctataaaaactagttctacccttgatgtttatgatcca
ggttatctaaagaacatccaaactgcaaatttgtggctgcaaatagccatagataacagc
acacatatgcttcctctgatactaaaagaccttgaacacaaaacttttaaagccattcgt
tttcgtaatctctttgagtttaggtactatactgacacagaagatattttctatggatta
cagtatataaacacccaggagctgacctttcacaatgggaaattcaatgaggatcttcta
cgaatggcccttgtgaatttagaaaaaagtgagattaaatcactcggattgttcttcatt
gattttgcccggtcacaagaatttgtgaatagtgaggagggatccagtatgacaaaccta
gtactggatatgttggttttgtcggatatcagcaacccagaaatcttaacctttgactgg
agttttacttggttgaacaagatccgccacctgcaaataaacaatgtgaattttaacttt
gtgccctgtgatgcatgggaggagatgaaagaggttgaaatacttgatctgtccaataac
cgccttaaggacaattttctttttaaccagcaatgtgactacacagatacgatgttgggg
cttcacacctttaatcttagcaataacaaactgaccagtcttagcaactttgcatttctt
gctggagagttcagacacctacgggtaattgatattagttacaatcactttggttttaaa
gggaacagcccctgcttttggaaaccaaacatcaccacagttgtcgctaaccataacagt
atggtttttgacagcttcaaatgtctcccaactactgtattgtacctcgatctctcctac
tgtaatatagaccagttagatgtgaactatttcaggaaggctgttcatctaagagaggtc
tacctcagtggtaacaaaattaaattcataccatctgattggaagagccccagtataagg
tcactggctttggatggaaactcttttggaattattagtatgaggtcattcatgggattg
cccaacctggagcagctcagggcagggaacaacccttaccactgtacctgtgagctccac
aatttcataaagcaaaccgaactcaaaggcaaagttaacattacagactggccagaaaac
tacaggtgttaccacccagaagccttgctcaatacaatggtatctaattatctccctgca
catatagtgtgtgatatcaggctggtcattgtgatttctgttgtcacgacagtaggagct
gtgctagcactcattataatatgttatatctgtaatataccgtggtatgccaaagctaca
taccaaatcgtcagagcaaaatataggtctcataaagaaggactagcgctttctgcggac
tatatgtttcatgccttcatttcctacagccactcagatgcagactgggtaagggatgag
ctgctaccatgcctggagaactccaagcccccttaccgtctttgcattcatgaaagagac
tttatcccaggaaaatggatcattgataacataattgagaacattgaaaatagtaggaag
gttatctttgtcctgtcacaaaacttcgtgaacagtgagtggtgcaactatgagctctac
tttgcccagcagcgagcaatgggcaagaccttcagtgacgtcattctagtggtaaaagaa
cccatcgatccaaactcactgcccagcaagtactgtaaactcaaaaagatgctgagcaac
aaaacctatttagagtggcctgaacaatccaaacatcaagccttcttctgggcacagctg
agaagtgtcatgggaaagcctaatcacacacaacagtcctcagcctccctgcgcaggcat
tccacaagaatgaacacagtgtctgtgattgagctggctcaggaacatcaaaagattgca
gattcagggcaaaagatagcttcttag
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integrated database retrieval system
