Clarias gariepinus (North African catfish): 128524472
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Entry
128524472 CDS
T10780
Symbol
hacd2
Name
(RefSeq) very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2
KO
K10703
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:
4.2.1.134
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00062
Fatty acid elongation
cgar01040
Biosynthesis of unsaturated fatty acids
cgar01100
Metabolic pathways
cgar01212
Fatty acid metabolism
Module
cgar_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
128524472 (hacd2)
01040 Biosynthesis of unsaturated fatty acids
128524472 (hacd2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgar01004
]
128524472 (hacd2)
Enzymes [BR:
cgar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.134 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
128524472 (hacd2)
Lipid biosynthesis proteins [BR:
cgar01004
]
Fatty acid synthase
Component type
128524472 (hacd2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PTPLA
Motif
Other DBs
NCBI-GeneID:
128524472
NCBI-ProteinID:
XP_053353021
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All DBs
Position
5:complement(19656974..19665387)
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AA seq
247 aa
AA seq
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MSAPVMGSTKKPFNDGDQHNHKKKKGAGALATAYLVIYNVIMTAGWLVIAVGLVRAYLTR
GSYHGLYYSIEKPLKFFQTGALLEILHCAVGIVPSSVVLTGFQVMSRVFLTWAVTHSVRE
VQSEDSVLLFVVAWTVTEIIRYSFYTFSLLNHLPYLIKWARYTFFIVLYPMGVAGELLTI
YAALPYVQKTGLYSVTLPNKYNFSFDYYTFLILTMVSYIPLFPQLYFHMLRQRKKVLGHV
EEYSKVE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcacctgtcatggggagcacgaaaaaaccctttaacgatggagaccagcacaac
cacaagaagaagaagggagcaggcgcgctggccaccgcctacctggtcatctacaacgtg
attatgaccgctgggtggttggtcattgctgtgggtcttgtccgggcatatcttactaga
ggcagctaccatggtctgtactactcaatagagaagccactgaagttctttcagactgga
gctctccttgagatattgcattgtgctgttggcattgtaccttcctctgtggtcctgact
gggtttcaggtgatgtcacgtgtgttcctcacgtgggctgttacacacagtgttagagaa
gtccagagtgaagacagtgtgctcctctttgtggtcgcgtggactgttacggagatcatc
cgctattcattctacactttcagcttactcaaccacctgccttatcttataaaatgggca
agatacacattttttattgtactctaccccatgggagtggctggagaacttctgaccatc
tatgctgctctgccttatgttcagaagacaggcctctattctgtcactttgcccaacaag
tataatttctccttcgattattatacctttcttattctcactatggtctcctacatcccc
ctgttccctcagctctacttccacatgttgcggcagagaaagaaagttctgggtcacgtg
gaagaatacagcaaagtggaataa
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