Clarias gariepinus (North African catfish): 128526198
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Entry
128526198 CDS
T10780
Symbol
snrpb
Name
(RefSeq) small nuclear ribonucleoprotein-associated proteins B and B'
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128526198 (snrpb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128526198 (snrpb)
03041 Spliceosome [BR:
cgar03041
]
128526198 (snrpb)
03032 DNA replication proteins [BR:
cgar03032
]
128526198 (snrpb)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
128526198 (snrpb)
Spliceosome [BR:
cgar03041
]
Complex A
U1 snRNP components
Sm proteins
128526198 (snrpb)
U2 snRNP components
128526198 (snrpb)
Complex B
U1 snRNP components
128526198 (snrpb)
U4/U6.U5 tri-snRNP components
128526198 (snrpb)
Complex C
U2 snRNP components
128526198 (snrpb)
DNA replication proteins [BR:
cgar03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
128526198 (snrpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
128526198
NCBI-ProteinID:
XP_053353791
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All DBs
Position
6:22846201..22850533
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AA seq
238 aa
AA seq
DB search
MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGVAGGPGVGRAAGRGVPAGAPM
AQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAGASIAGAPTQYPPGRGGPPPPMGRG
APPPGMMGPPPGMRPPMGPPMGMPPGRGAPMGIPPPGMRPPPPGMRGPPPPGMRPPRP
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcggaaagagcagtaagatgcttcagcacattgactacaggatgcgctgtata
ctgcaggacggccggatcttcatcgggacgtttaaagcgttcgataaacacatgaacctc
atcctgtgtgactgcgacgagttcagaaagatcaaacccaaaaattccaagcagccagaa
agggaggagaagcgagtgttgggtttggtgttgctcagaggagagaatctggtctccatg
actgttgaaggaccacctcccaaagatactggcattgccagagtgcccctggctggggtg
gcaggaggcccaggtgtgggcagagcagcaggtagaggtgttccagctggagctcctatg
gcccaggctcctgctgggcttgctggacctgtaagaggagtcggaggcccatcacaacag
gtgatgacccctcagggcagaggcacagtggcagcagcagcagctggtgctagcatcgct
ggtgcacccacacagtatccaccaggccggggtggccctcctcctcccatgggtagaggt
gcaccacctccaggcatgatgggtcctcccccaggcatgaggccacctatgggtccaccg
atgggcatgccacctggccgtggtgctcctatgggcattccccctccaggcatgagaccg
ccgccgccaggaatgagagggccacctcctccaggcatgcgtcccccaagaccttga
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