Clarias gariepinus (North African catfish): 128526481
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Entry
128526481 CDS
T10780
Symbol
vdrb
Name
(RefSeq) vitamin D3 receptor B isoform X1
KO
K08539
vitamin D3 receptor
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128526481 (vdrb)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128526481 (vdrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgar03310
]
128526481 (vdrb)
Protein phosphatases and associated proteins [BR:
cgar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128526481 (vdrb)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128526481 (vdrb)
Nuclear receptors [BR:
cgar03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
128526481 (vdrb)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
zinc_ribbon_6
Shisa_N
Motif
Other DBs
NCBI-GeneID:
128526481
NCBI-ProteinID:
XP_053354346
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All DBs
Position
6:2070011..2096182
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AA seq
425 aa
AA seq
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MQKNSVMESAVSTSTQVPDEYDRNVPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRK
ASFTCPFSGSCTITKDNRRHCQACRLKRCLDIGMMKEFILTDEEVQRKKDLIQKRKDEEA
QKEAQKPRLSEEHSMVISTLVEAHHKTYDDSYSDFNRFRPPVREGPVTRSASRAASLHSL
SDASSDSFRHSPESGDSKLNLSSMLMMYQDQASSPDSKEDEGSRLSMLPHLADLVSYSIQ
KVIGFAKMIPGFRELTAEDQIALLKSSAIEVIMLRSNQSFSLEDMSWCCGGPEFKYCVND
VTKAGHTLELLEPLVKFQVGLKKLNLHEEEHVLLMAICLLSPDRPGVQDHERVESLQDRI
SEVLQAYIHVHHRGRLQYAKMIQKLAELRSLSEEHSKQYRTLSFQPEHSMQLTPLVLEVF
GGQVT
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaactcggtgatggagtccgcagtcagcacatccacgcaggtgcctgatgaa
tacgaccggaacgttccgaggatctgcggcgtgtgtggagacaaagctactggcttccac
tttaatgccatgacctgtgagggctgcaagggcttcttcagacgcagcatgaagcgcaag
gccagctttacgtgccctttcagcgggagctgcaccatcactaaagacaaccggcgtcac
tgccaggcctgcagactcaaacgctgtctggatatcggcatgatgaaggagtttatcctg
actgatgaggaggtgcagaggaagaaagatctgatccagaagaggaaggatgaagaggcg
cagaaagaagcgcagaagccccgcctctctgaggagcacagcatggtgatctccacgctg
gtggaggcgcatcacaagacctacgacgactcgtactctgacttcaaccgcttcagacct
ccagttagagagggtccagttacacgcagtgccagtcgagctgcttctctacactcactg
tctgatgcttcatccgactcctttcgccactcgcctgagtcgggcgacagtaaactcaat
ctgagcagcatgttgatgatgtatcaggaccaagcttctagtcctgactcaaaggaggac
gagggttctcgcttgtccatgctgcctcacctggctgatctggtcagctacagcatccag
aaggtcatcggattcgccaagatgatccccggattcagagagttaacagcagaggaccag
atcgcgctgctgaagtccagtgccattgaggtgatcatgctgaggtccaatcagtccttc
agtctggaggatatgagctggtgctgcggggggcccgagttcaagtactgcgtcaacgat
gtcaccaaagctggccacactctggagctgctggagccgctggtgaagttccaggttggc
ttgaagaagctgaatctgcacgaggaggaacacgtgctgctgatggccatctgcctgctg
tcccccgaccgtcccggcgtgcaggatcacgagcgagtagagtctctgcaggaccgtatc
tccgaggtcctccaggcgtacatccacgtgcaccaccgcggccgcctgcaatacgccaag
atgatccagaagctggcggagctgcgcagcctgagcgaggaacactcgaagcagtaccgc
acgctgtccttccagcccgagcacagcatgcagctcacgcccctcgtcctcgaggtgttc
ggcggacaggtcacctag
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