Clarias gariepinus (North African catfish): 128527775
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Entry
128527775 CDS
T10780
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
cgar04260
Cardiac muscle contraction
cgar04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128527775
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
128527775
04261 Adrenergic signaling in cardiomyocytes
128527775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128527775
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128527775
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
Cache_3-Cache_2
DUF2201
VWA_CoxE
Glyco_hydro_98C
Motif
Other DBs
NCBI-GeneID:
128527775
NCBI-ProteinID:
XP_053356323
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Position
7:complement(12748531..12881131)
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AA seq
1080 aa
AA seq
DB search
MARAMSPGSPLTPLLIVLACSALHGSRASQFPTSLIIKEWVDQMQQELVTLADTATAGKS
LVEIYMKNQKYYSVETNHAGRLVENAARNIENFLSKRAKALEALARAAENFQMEHQWKDE
FDENDIVYYNAKDNLEVNETEGRKNRIRPKFKEEPAFKNRLISYNHTAVHIPTDIYDGST
IVLNELNWTEALEDVFKKNKEEDPTLLWQVFGSATGLARYYPASPWKDARKTPSKIDLYD
VRRRPWYVQGAASPKDMLILVDASGSVSGLTLKLIRTAVSEMLETLSDDDYVNVVNFNTK
VNNTACFKHLVQANVRNKKILKDAVQNITAKGITNYTKGFEFAFEQLDDPFVMRRANCNK
IIMLFTDGGEERAQEIFTRHNRDKKVRVFTFSVGQHNYDTGPIKWMACTNKGYFYEIPSI
GAIRINTQEYLDVLGRPMVLANSKEVQWTNVYLDALELGLVITGTLPVFNKTKSRDNGSR
IQHGNQLILGVMGVDVSLDDIKRLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKNPKFQE
PVTLDFLDAELENDIKVKIRTDMIDRVPGERKIETLVKSQDERYIDRGVRTYTWVPVNGT
DYSLALVLPEYNMHYIQANLGDIKQAMFLDTLQIEKFEEYGYTFVAPREYCQDLKSSTNN
TQFVMDVNEYMDKRTPSDPMCNVTLLNRLLLDAGLTAELVKMWTQQSVEGVLARFVATDG
GITRIYPKSAGEEWTENAETFDSSFYKRSLDNDIYIFTAPYVNKSRESSYESGILVSKAV
ELDFNGVKLKPAVVGVKLNVSAWMNSFMNATIKINCKDEICGCLRNDKYVDCVILDDGGF
LLMSNQDEYITQIGQFFGEVDPILMVNLLNTSLYSFNKTYDYQSVCDPEKEPKAAAGPRS
AYVPTVADMLNLGWWASTAAWSMLQHFLLSLTLPSFLHAEEDISDAYSKESCITEQTQYF
FENDNKSFQGVLDCGNCSRMYRAEKLPSTNLVFLITDAKGTCFCDAKPVRQAEQPSNGPD
PCILAHNPRYRKGPEHCFDNNGDEDASDCGSGSSLIPSFWPVLALQLLLLWLLTGTSCCS
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgcgatgagcccgggatcgccccttacgccgctgctcattgtgctcgcgtgc
tcggcgcttcacggctcgcgcgcctcgcagttccccacgtcgctcatcataaaagagtgg
gtggaccagatgcagcaggagctggtgaccctagctgacacggccactgcaggaaaaagc
ctagtggagatctatatgaagaatcagaaatactacagtgtggaaacaaatcatgcagga
agactggttgagaatgcagcacggaatatagagaactttttaagcaagcgtgcaaaggca
cttgaggctttggcacgtgctgcagaaaactttcagatggagcatcagtggaaggacgag
tttgacgagaatgacatagtctattataacgctaaggacaaccttgaagtcaacgaaacc
gaaggaaggaaaaaccggatccgaccgaaatttaaagaagaaccagcttttaaaaaccgt
ctcatctcgtacaaccacacagctgtgcacatccctacagacatatacgatggctccacc
atcgtgttaaatgaactgaactggactgaagccctggaggatgtgtttaagaagaacaag
gaggaagacccaactttactctggcaagtgtttggcagcgctacaggactggctcgctat
taccctgcctctccatggaaggatgccaggaaaaccccaagtaaaatcgacctttatgac
gtccgccgcagaccctggtatgttcagggagctgcctcgcctaaggacatgctcattctg
gtggacgcgagcgggagtgtgtctggattgactttaaaactcatccggacagccgtcagt
gagatgctggagacgctctcagatgatgactatgtcaacgtagtgaattttaacacaaaa
gttaacaacacagcatgcttcaaacatctggtccaggccaacgtacgcaataagaaaatc
ctgaaggatgcagtgcagaacattacggctaaaggcattaccaactacacaaagggcttt
gaatttgccttcgaacagctcgatgatccgtttgtgatgagaagagctaattgcaacaaa
atcatcatgctttttactgacggaggggaggagagagctcaggagatcttcactagacat
aaccgtgataagaaggtccgtgtcttcactttctctgttggccaacacaactacgacacg
ggacctataaagtggatggcttgtaccaataaaggttacttctatgaaatcccttctatt
ggagcaatccgcataaacacacaggagtatttggatgtcctgggcagacccatggtcttg
gctaattccaaagaggtgcaatggactaacgtttacttggacgccttggagttgggtctg
gtcatcactggcactctacctgtcttcaacaagaccaaatccagagacaacggctcacgc
atccagcacgggaaccagctcattctaggagtgatgggagtggatgtgtctctggacgat
attaaaagactaacaccgcgctttacgatcggccccaatggatattatttcgcgattgat
cccaatggctacgtgctgctccatccgaacctccagcctaagaatccaaaatttcaggaa
cctgttactctggactttctggatgctgagctggaaaatgatattaaagtcaagataaga
actgatatgattgacagggttcctggtgagaggaagattgaaacactggtcaaatctcaa
gatgagagatacattgaccgaggagtgaggacttacacatgggtaccagtcaatggcaca
gactacagtttggccttggttttgcctgagtacaacatgcactacattcaagcaaaccta
ggagacataaagcaagccatgttcttagatactctgcaaatagagaaatttgaggagtac
ggctacacctttgtagcacccagggaatattgccaggacttgaaaagctccaccaacaac
actcagttcgttatggacgtcaacgagtacatggacaagagaacacccagtgacccaatg
tgtaatgtgactctgctcaacagactgttacttgatgctggtcttacagctgaactggtg
aagatgtggacacagcagagtgtagaaggagtgttagccaggtttgtggctacagatggg
ggcatcacacggatttaccctaaaagtgctggagaggagtggaccgagaatgcagagacc
tttgattccagtttctacaagaggagtttagacaatgacatatacatcttcactgcccct
tatgtcaacaagagcagggagtctagctacgagtctggtattctggtcagtaaagctgtg
gaactggacttcaatggcgtcaaactcaaaccagctgtggtgggagtcaaacttaatgta
tctgcctggatgaacagcttcatgaatgccaccataaagataaattgtaaggacgagatc
tgtggctgcctcaggaacgataagtatgtggactgtgtgatactggatgatggaggcttc
ctgctcatgtctaatcaggacgaatacatcacgcagataggtcagttcttcggtgaagtg
gaccccattctgatggtcaatctgttaaatacatcactctattcgtttaataaaacctac
gactatcagtcagtatgtgatccggagaaagagccgaaggccgctgctgggccaagatct
gcctatgtgcctaccgtggctgacatgttaaatctgggctggtgggcctccactgctgca
tggtcaatgcttcagcacttcctcctcagtctcactttgcctagttttctacacgcagag
gaggacatctcggatgcttattcaaaagaaagctgtataacagaacagacccagtatttc
tttgagaacgacaacaagtcttttcaaggtgtcctggactgtggaaattgttctagaatg
taccgagcagagaagctgcccagcactaacctggtgtttctcattacggatgccaagggc
acctgtttctgtgatgccaagccagtgagacaagctgagcaaccttctaatggtccagac
ccctgtatactggcccataacccccgctacagaaaaggccctgagcactgctttgataac
aacggtgatgaagacgcttccgactgtggcagcggctcaagtttgattccctctttctgg
ccggtgctagctcttcagctgctgctcctctggctgctcactggaaccagctgttgctcc
tga
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