Clarias gariepinus (North African catfish): 128527795
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Entry
128527795 CDS
T10780
Symbol
trpc6b
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128527795 (trpc6b)
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128527795 (trpc6b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Cmr1_C
RIN1
APG6_N
Motif
Other DBs
NCBI-GeneID:
128527795
NCBI-ProteinID:
XP_053356357
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Position
7:complement(11200396..11217233)
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AA seq
866 aa
AA seq
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MRRPMCSEGLPPEQSSSRNDLCEEGLAIFRQRSSYLRRTNADRKITQSQMLAKSRRLAMR
RPAYMFSAHCNSLSLAEELFLEAAEYGNIPVVRKMLEELPELNINCVDYMGQNALQLAVA
NEHLEVIELLLKKDNLARIGDALLLAISKGYIRIVEAILAHQAFADTSKLTNSTLQAEIN
DDFFAYDDDGMRFSQDITPIILASHCHEYEIVHILLLKGARIERPHDYFCKCNTCIYHQR
HDSFSHSRSRINAYKGLASPAYLSLSSEDPVLTALELSNELAVLANIEKEFKNDYKKLSM
QCKDFVVGLLDLCRNTEEVEAILNGDTELNGSDKTGRPSLIRLKLAIKYELKKFVAHPNC
QQQLLSIWYENLSGLRQQTTAVKLLVVFGVAVGLPILALLYWIAPSSKLGKIIRGPFLKF
VAHAASFTIFLGLLIMNAADRFEGTSLLPNMTIHDHPTQLFRMKTTPFTWMEMLIISWVI
GMIWAECKEIWSQGPREYLLEPWNLLDFGMLAIFVSSFIARFMAFWHAYTAQSYVDEHYT
DLSNITLPYEIEYYRLARIHWVPSDPQLISEGLYAIAVVLSFSRIAYILPANESFGPLQI
SLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYLGAKQNNAFTTVEESFKTLFWAIFGL
SEVKSVVINNGHKFIENIGYVLYGVYNVIMVIVLLNMLIAMINSSFQEIEDDADVEWKFA
RAKLWFSYFEEGGTLSVPFNLIPSPKSVLSLTHKIKQLLPTPLHRQKDSLKEDTELNELG
EQKESNYAGSPQSSRYRRIMKRLIKRYIIKAQMDKESDEVNEGELKEIKQDISSLRYELL
EKSSETEELAEMIRTLAETLSRQHNH
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaccgatgtgctccgagggcttacctccagaacaaagttcatcccggaatgat
ctgtgtgaggaaggactcgcaatttttcgacaaagatcttcttacttaaggaggaccaat
gctgacagaaaaattacccagagccagatgttggcgaagagtcgtcgcttggctatgcgc
cgcccggcatatatgtttagtgcccactgcaacagcctgtcacttgccgaagagctattc
ctggaggcagctgagtatggaaacatccctgttgtccgtaaaatgttggaagaactgcct
gaacttaatatcaactgtgtggactatatgggacagaatgcactacagctggcggtggcc
aatgagcacttggaggtgatagaactgctgctgaagaaagataacctggccaggatcggc
gatgctctgcttctggccatcagcaaaggctacatccgaatagtggaggccatattggct
caccaggcctttgcagacacatcaaagctaaccaacagcaccctgcaagctgaaataaat
gatgacttctttgcctacgatgatgacggcatgcgtttttcacaagacattacacccatc
atcttggcttcccactgccatgagtatgaaattgtacacatcctgttactaaagggagct
cgcattgagcggccacatgactacttctgtaaatgtaacacctgcatctaccaccagagg
catgactccttcagtcactctcggtcccgtatcaatgcttataaggggctggccagcccg
gcttacctctcgctctcaagtgaagaccctgtgctgactgctctggagctgagcaatgag
ctggctgtgctagccaacatagagaaggagttcaagaatgattacaagaagctgtctatg
caatgcaaggactttgtggttggactgttggacttgtgccggaacacagaggaggtggaa
gccatcttgaatggggacactgagttaaatggcagtgacaaaacaggcagaccgagtctc
attcgcctaaaactggccatcaagtatgagcttaaaaagtttgttgctcatccaaactgt
cagcagcagctcctctccatttggtatgaaaatctgtctgggctccggcagcagactacc
gctgtgaagttgctagtggtgttcggggtggccgtcggtctgccaatcctggctctgctc
tactggatagcgccctcaagcaagttgggaaagatcatccgtggtccctttctcaagttt
gtggcccatgcagcttcgttcaccatcttccttggtctcctgattatgaatgcagcagat
cggtttgaggggacaagtctccttccaaacatgaccatccatgaccatcctacacagctg
ttccgcatgaaaaccacccctttcacctggatggagatgctgatcatttcctgggtcata
ggaatgatttgggctgaatgcaaagagatctggtctcaaggccctcgggaatatctgttg
gaaccctggaacctgttggactttgggatgctggccatatttgtgtcttcattcatagca
agattcatggctttctggcatgcttacactgcacagagttatgttgatgagcactacacg
gacctgtctaacataacactgccctacgagattgagtattatcgcttagcacgaatccat
tgggtgccatcagacccccagctgatctcagagggtctgtatgccattgctgtagtgctg
agcttctcgcggattgcctacatcctgccagccaatgaaagcttcggccccctgcaaatc
tccctgggcagaacggtcaaagacatttttaagtttatggtgatcttcattatggtgttt
gtagcctttatgattgggatgttcaacctctactcgtactacctcggagcaaagcaaaac
aatgccttcacaacagttgaagaaagctttaaaaccttgttctgggctatttttggactt
tccgaggtcaaatctgttgtcattaataatggacataaattcatcgaaaatattggctat
gtcctttatggagtttacaatgttatcatggttatcgtcctcctcaacatgctcatcgct
atgatcaacagctcgtttcaggaaattgaggatgacgcagatgtggagtggaagtttgcc
cgggctaagctgtggttctcctactttgaggaaggtggaactttgtctgtgccttttaac
ttaattccaagccctaagtctgtcctcagcctgactcataaaatcaagcagctacttcca
acacctctgcacagacaaaaagacagcctgaaggaggacaccgagctcaatgaactgggt
gaacaaaaagaatctaattacgcaggatcacctcaatcaagccgttatcggaggataatg
aaacgattaattaaaagatatatcataaaagcacaaatggacaaagagagtgatgaggtt
aatgaaggggagttaaaggagataaagcaggacatctcaagtttgcgctatgagctcttg
gagaagtccagtgagacagaagaattggcggagatgatcaggacactggcagaaacactt
agcagacagcacaaccactag
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