Clarias gariepinus (North African catfish): 128528939
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Entry
128528939 CDS
T10780
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04060
Cytokine-cytokine receptor interaction
cgar04672
Intestinal immune network for IgA production
cgar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128528939 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
128528939 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
128528939 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgar04052
]
128528939 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
cgar00536
]
128528939 (cxcl12a)
Cytokines and neuropeptides [BR:
cgar04052
]
Cytokines
Chemokines
128528939 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
cgar00536
]
Heparan sulfate / Heparin
Chemokines
128528939 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
128528939
NCBI-ProteinID:
XP_053358122
LinkDB
All DBs
Position
8:17792163..17798964
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AA seq
98 aa
AA seq
DB search
MDVRVILVAVLVTVTIYGITSDAKPISLVERCWCRSTVNTVPQRNIRELKFVHTPNCPFQ
VIAKLKSNKEVCLNPETKWLQQYIERALEKMKKAKQNQ
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgagagtgatcttagtggcggttctggtaacagtgactatttacggaatcact
tcagacgccaagcctatcagcctggttgagaggtgttggtgccgttctacagtcaacacg
gttccacagaggaacatccgtgagctgaagttcgtccacacacccaactgtcctttccaa
gtcattgccaaactgaagagcaataaagaggtgtgccttaatcctgagacaaaatggcta
cagcagtacatcgagagagcccttgaaaaaatgaagaaggccaaacagaatcagtaa
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