Clarias gariepinus (North African catfish): 128529214
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Entry
128529214 CDS
T10780
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
cgar04020
Calcium signaling pathway
Brite
Enzymes [BR:
cgar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
128529214 (ret)
Protein kinases [BR:
cgar01001
]
Receptor tyrosine kinases (RTK)
RET family
128529214 (ret)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD1
RET_CLD4
RET_CRD
Cadherin
Pkinase_fungal
RIO1
ABC1
Motif
Other DBs
NCBI-GeneID:
128529214
NCBI-ProteinID:
XP_053358581
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Position
8:complement(14793148..14818079)
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AA seq
1108 aa
AA seq
DB search
MGRTRVFTLWGDTVLVLLLLWEGSWGLYFPQPTYTESIYIGQAAGTPVLQVHPMRERASE
QPYFCLYWKKPAPYASWFYIDSATGVIYMNKTLDWTDFESLSSNWPALARRLSLKVTVSQ
MQCALFHSVEISLIFFNATAPACGHMKSMKLCFPDRDTNPHIKENRIPGSLRQLRRFTHA
NLCPNYTISYEVEPETPGPFVVNDTTSELVVTAPLDREEKEVYLLLIKCLVWREKTMHTV
LTTLHINIHDEDDNPPYVNGTDTEDVLIEFSRSKGAAFGNLFVYDRDTTSTYQKEQSQNK
YVWTLLTNDSWIKDTFTIQQNFSEEKPIFGNVRGTVYKYKLLLNRNILVDEKRSFQLDFL
VNDTTFQGPEGTLMLHFNVTILPVPISFGNTSYIFGLSRKSMAYSKIDNVCVDNCLKFKG
IEIAYHLELGVKNISADIQSCYTAVDVARNLEDMSGVLYVNDTEPLHRPECQELHYVLVA
DELHKKFQTKTTVIISFEGEADPLMTEGQRLLACAAKRQRGECETFRGLGTPSGRCQWRQ
STEKGVISEKYSTCSPDLRTCPDGYCDVIESKNISICPQDCTREPIIGGHERGLMLGIKA
GHGTCYCYSEKCFCEQDDMEEAICDDMCKTVIATAVLLSFIVSILLSSYFIHRYHKSTPK
PPIASAEMTFRRPAQSYPISYSANNVRRGSLDSMENQVAIDTFKIPEDPKWEFPRKNLVL
GKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENASHSELRDLLSEFTLLKQVNHPH
VIKMYGACSQDGPLYLIVEYAKYGSLRNFLRESRKVGPSYMGNDANRNSSYLENPDERAL
TMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYV
KRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKT
GYRMEKPENCTEEMYNLMLRCWKQEPDKRPTFSEISKELEKMMVKSRDYLDLAASTPADA
LLYDDTLSEEDTPLVDCNNAPLPRTLPSTWIENKLYGMSYPNWPEKSPVLLNRLDATNPE
FTRYANDSVYANWMALPSPTKIMDKLDS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggacgcgggtttttacgctgtggggagacaccgtcctggtcctcttgcttctc
tgggaaggctcttggggactgtatttccctcagcccacatacacagagagcatctatatt
ggccaggctgcaggtacaccagtgctacaggtgcatcccatgcgggagagagcttcagag
cagccatacttctgcctgtactggaagaaacctgctccttatgcatcgtggttctatatc
gactctgcgacaggagtgatctacatgaacaaaacactggattggacagattttgagtca
ttatctagcaactggcctgcgctggcaaggaggttgtccctgaaagtgacagtatcccaa
atgcaatgcgcactgtttcacagtgtggagatcagtcttatattcttcaatgcaacagca
cccgcatgtggccacatgaagtcaatgaaactgtgctttcctgatcgcgacacaaacccc
cacatcaaggagaaccgcatacccggatctttgcgccagcttcgtcgctttacccatgct
aacctctgtcccaactacaccatcagctatgaggtggaaccagagaccccagggccattt
gtggtcaatgacaccacttctgagctggtagtcacagcacctttagaccgtgaggaaaag
gaggtctatcttctgctcataaaatgtttagtatggagagaaaagacaatgcatactgtt
cttactaccctgcatataaacatacatgatgaagatgacaatcccccatatgtgaatggc
acagacactgaagatgtgcttattgaatttagccgcagtaagggagctgcgtttggcaat
ctgtttgtttatgacagagacacaacttctacctatcagaaggaacagagccagaataag
tatgtatggacgcttttgactaatgactcctggattaaagacacatttactattcagcag
aatttcagtgaagaaaagcccatctttggcaacgtgcgaggcacagtctataaatacaag
ttgcttctcaacaggaacattttagtggatgagaagcgctcatttcagttggattttctg
gtcaatgatactacatttcaaggccctgagggaactctgatgctgcatttcaatgttacc
atcttgccagttcctataagctttggtaacacttcctacatctttgggctctctcggaag
tccatggcctactccaagattgacaatgtatgtgtggacaactgcctgaagttcaagggt
attgaaattgcataccatttagagttgggtgtcaagaacatctcggctgacattcagtcc
tgctacacggcagttgatgtggcacggaatctcgaggacatgtctggtgttctctatgta
aacgacacagagcccctacacaggcctgaatgtcaggagctgcattatgtgcttgttgct
gatgagctgcataagaagtttcagacaaaaacaacagtcatcatcagttttgaaggcgaa
gcggatcctttaatgacagaggggcagcgcttgttggcctgtgcagcaaaaagacagcgt
ggggagtgtgagacatttagaggcctgggaactcccagtggaagatgtcagtggagacag
agcacagaaaagggtgtcatatcagaaaagtattccacttgttctccagacctgcgtact
tgtccagatggctactgtgatgtgattgaaagcaaaaatatatccatatgtcctcaggat
tgcacccgtgagccaattattggaggccatgagagaggcctgatgcttggcattaaggca
ggacatggaacctgctattgctattcagaaaagtgtttttgtgagcaagatgatatggaa
gaggcgatatgcgatgatatgtgtaagactgtcatagccactgcagtccttctctccttt
atcgtctccattctcctctcctcctacttcatccatcgttatcacaagagcacccccaaa
ccacccatcgcttcagctgagatgactttccgcagacctgcccagtcctatcctatcagc
tactccgccaacaacgtccgacgaggatctctggactccatggaaaaccaggtcgccatc
gacaccttcaagatacctgaggatccgaagtgggaattcccacgaaagaacctagtcctg
ggtaaaactctcggagagggagagtttgggaaggtcgtaaaagcaacagcattccggctt
aaaggaaaggcaggctacactacagtagctgtaaaaatgttaaaagaaaacgcttctcac
agtgaacttcgtgacctgttgtcagaattcacccttcttaagcaagtcaaccatccacat
gtaatcaaaatgtatggtgcttgtagccaggatggccccttgtatctgatcgttgaatat
gccaagtatggatcactgcgaaactttctgagagagagccggaaagtggggcccagctat
atgggtaacgatgccaaccgcaactccagctaccttgagaatccagatgaaagagctctg
accatgggagacctcatttcatttgcctggcagatttccagaggaatgcaatacctagct
gaaatgaagcttgttcatagagatcttgctgcaaggaatgtgcttgtagcagagggcaga
aagatgaagatatcagactttggtttgtctcgagatgtctatgaggaagattcctatgta
aagaggagcaagggtcgtattcctgtcaaatggatggctattgaatccctgtttgaccac
atatataccacacaaagtgacgtctggtccttcggagtgctgttatgggaaatcgtgacc
ctgggtggaaatccgtacccaggcattgcaccagagcgactctttaatctactcaagact
ggctacaggatggaaaaacctgagaactgcactgaagaaatgtataatctgatgcttcgc
tgctggaagcaggaaccagataagagaccgacctttagtgagatcagcaaagagctggag
aagatgatggtgaaaagcagagactatctggatctggcagcttccactcctgcagacgca
ctgctatatgacgacactctgtctgaagaggatactcctctagtggactgtaataacgcc
cctctccctcgaaccctcccttccacttggattgaaaacaagctctatggcatgtcatac
ccgaactggcctgagaagagcccggtactgctcaacagacttgatgcaactaatccagaa
tttacaagatatgccaatgatagtgtttatgcaaactggatggctttgccttctcctaca
aaaattatggacaagcttgatagttaa
DBGET
integrated database retrieval system
