Clarias gariepinus (North African catfish): 128529749
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Entry
128529749 CDS
T10780
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00310
Lysine degradation
cgar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128529749 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128529749 (prdm6)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128529749 (prdm6)
Enzymes [BR:
cgar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
128529749 (prdm6)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128529749 (prdm6)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128529749 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_15
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
128529749
NCBI-ProteinID:
XP_053359217
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All DBs
Position
9:18468717..18492564
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AA seq
563 aa
AA seq
DB search
MLKPGDQSGSAFLKVDPTYLQHWQQLFPQSQLKNCAIPQIPAPDRAPVAAESLRQRTGLI
SSTTASAALTPSSSSSCAPAVSALAGLTQLSAPQLALFGHTLCTEVAPTENSGAPQSKEL
CLQSNYNDKSSRLKLTSEELDYYLYGQQRMEIIPLNNHTSDLNNRCDMCADNRNGECPMH
GPLHSLRRLVGTSSASTAVPPPEVPEWLRDLPREVCLCTSTVPGLGYGICAAQRIPQGTW
IGPFQGIPLLLDKVQTGAMRNTRHLWEIYDQEGTLQHFIDGNDPSKSSWMRYIRCARHCG
EQNMTVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVME
AMSRQESLQSFNKTSKSSSPTMLQRSMVFPHSPCSRSFSLLDKVGNMESGFNQLNPKNQR
VLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFAQ
PSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQL
SRHQRMPNECKPISESSESIEVD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgggggatcagagcggttctgctttcctcaaagtggatccgacttacctt
cagcactggcagcagcttttcccgcagagtcagctgaagaactgcgcgattccacagatc
ccggcgcccgatcgcgcgcctgtagctgcagaaagccttcgccagagaaccggcttgatt
tcctccaccaccgcttcggctgctttaacgccgtcctccagttcgtcctgcgctcctgcc
gtgtccgcgctcgcggggttaacgcagctctctgcgccgcagctcgcgctattcggacac
acgctctgtactgaggtcgcaccgacagaaaacagcggcgcgcctcagtccaaggaactt
tgcctgcagtccaactataacgacaaatcgtcccggttgaagctgacctcagaggaactg
gactactatctatacggacagcagaggatggagattattccactgaacaatcacaccagt
gatctcaacaaccgctgtgacatgtgtgcagataaccggaatggcgagtgccccatgcac
gggcccctgcactcactgcggcgcctggtagggacgagtagtgcatctaccgctgtgccc
cctcctgaggttcctgagtggctgcgtgacctaccccgtgaagtctgcctctgcaccagc
acagtgccaggcctgggctatgggatctgtgctgctcagcgaataccacagggcacttgg
attgggccttttcagggtattcctctgctgctcgataaggtgcagactggagcgatgcgc
aacacaagacacttatgggagatatatgaccaggagggcacgttacagcactttattgat
ggcaatgatccaagcaagtcaagctggatgagatacattcgctgtgccagacactgtggg
gaacagaacatgacagtggttcagtatagatcgtgtattttctatcgggcttgtatggat
atcccacgaggaacagagcttctggtctggtacaacgacagttacacctccttctttggc
atcccgctgcagtgcatcgcacaggatgaaaacttgaatgtgccatctactgtaatggaa
gccatgtcccgacaggaaagcctgcagtctttcaacaaaacatccaaatcctcttcacca
accatgctgcagcgctcaatggttttccctcactcgccctgctcacggagcttctcttta
ctggataaggttggcaatatggagtctggctttaaccagctaaaccctaagaaccagcga
gtcttggccagtcccacatccaccagccagctaaacagtgagttcagcgactggcacctc
tggaagtgtggccagtgcttcaaaacgttcacgcagcgcatacttctgcaaatgcatgtg
tgcacacagaacccagacagaccgtatcagtgtggacactgttcacagtcctttgcccag
ccctcagagctgcgtaaccacgtggtaacacattccagtgaccggcccttcaagtgtggc
tattgtggccgagcttttgctggagccacgacacttaacaaccacatccgcactcacact
ggggagaagccattcaagtgtgagcggtgcgagaggagcttcacacaagccacacagctt
agcagacaccagcggatgcccaacgagtgcaaacccatcagcgagagcagcgaatcaatt
gaggtggattag
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integrated database retrieval system
