KEGG   Clarias gariepinus (North African catfish): 128530030
Entry
128530030         CDS       T10780                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-R alpha chain-like
  KO
K06752  MHC class II antigen
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar04145  Phagosome
cgar04514  Cell adhesion molecules
cgar04672  Intestinal immune network for IgA production
cgar05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    128530030
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128530030
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    128530030
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    128530030
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgar04147]
    128530030
Exosome [BR:cgar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128530030
  Exosomal proteins of epithelial cells
   128530030
  Exosomal proteins of breast milk
   128530030
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 ig C2-set_2 I-set C2-set_3
Other DBs
NCBI-GeneID: 128530030
NCBI-ProteinID: XP_053359695
LinkDB
Position
9:complement(34771787..34775007)
AA seq 236 aa
MKLFLLFFTLMCVTDTEAESKHGDIKVIACSDTDKEYMLETDQEEMYYADFVKQQMVNML
PPFGESIDPPEGEYGRAVTNTGICKTNLEVGKTEYKDLEEPKDVPQNSIYPRDDVNVGTQ
NTLICHSVRFFPPPVRVRWTKNGEDVTDKSSLSQYYPNEDHTFNQFSHLTFTPMEGDVYT
CTVEHKSLETPDTKTWEVHVELPSVGPAVFCGVGLAVGLLGVATGTFFLVKGNQCN
NT seq 711 nt   +upstreamnt  +downstreamnt
atgaagttgtttctgctctttttcacactaatgtgtgtgacggatacagaggcagagtcc
aaacacggtgatataaaggtgattgcatgctcagacacggataaggagtatatgttggaa
actgatcaagaggagatgtattacgcagactttgtaaagcagcagatggtgaacatgctc
ccgccgttcggtgaatctatcgaccctcctgaaggagagtacgggcgcgccgtgacaaac
actgggatctgcaaaaccaacttggaagtggggaaaacagaatataaggacctagaagaa
cctaaagatgttccacaaaactccatctatccccgggatgatgttaacgtggggacacag
aacacactcatctgtcactcagtgcgtttcttccccccacctgtccgagtgcgctggacc
aaaaacggtgaagatgtgactgataaatcttcactcagtcagtactacccgaatgaagac
cacacgttcaaccagttctcccacctgaccttcactccaatggaaggagacgtttacacc
tgcacagtggagcacaagtccctggagacccccgacaccaagacatgggaggtgcatgtt
gagcttcccagtgtgggtccggctgtgttctgtggagtgggtctggctgtaggactgctc
ggagtcgctactggaactttcttcctcgtcaaaggaaaccagtgtaactga

DBGET integrated database retrieval system