KEGG   Clarias gariepinus (North African catfish): 128530033
Entry
128530033         CDS       T10780                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
  KO
K06752  MHC class II antigen
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar04145  Phagosome
cgar04514  Cell adhesion molecule (CAM) interaction
cgar04672  Intestinal immune network for IgA production
cgar05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    128530033
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128530033
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    128530033
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    128530033
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgar04147]
    128530033
Exosome [BR:cgar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128530033
  Exosomal proteins of epithelial cells
   128530033
  Exosomal proteins of breast milk
   128530033
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 C2-set_2 Ig_2 ig I-set
Other DBs
NCBI-GeneID: 128530033
NCBI-ProteinID: XP_053359698
LinkDB
Position
9:complement(34562474..34565445)
AA seq 232 aa
MKLLLIFFTLSCIKDAGAQIKLVDLGMAGCSDSDEEFVVEHDDEEVLHTDFKKQGLVMKL
PTFLDPIKWPAAYDLSVSLEELCKHDIDQAVKAYKSPPEALDIPQNSIYPRDNVRVGRKS
TLICYSARFFPPPVRITWTRNGVNVTDKSSLSQYYPNEDNTYNQFSHLPFTPQEGDVYTC
TVEHKSLETPDTKTWEVDVEIPSVGPAVFCVVGLAVGLLGVATGTFFLVKGN
NT seq 699 nt   +upstreamnt  +downstreamnt
atgaagctacttttaatatttttcacactatcatgcattaaggacgccggcgctcagatt
aagcttgtagacttaggtatggctggatgcagtgactcagatgaagagtttgtggtggaa
catgatgatgaggaagtattacacaccgattttaaaaaacaaggtctggtgatgaagtta
cctacatttttagaccctataaaatggcctgctgcttatgacctcagtgtctcactggaa
gagctctgcaaacacgacattgatcaagcagtgaaagcctacaaaagtcctcctgaagct
ctggatattccacaaaactccatctatcccagagataatgtgagagttggtagaaaaagc
acactcatctgttattcagcacgtttcttccctcctcctgtccgcatcacctggaccaga
aacggtgtaaatgtgacagataaatcctcactcagtcagtactacccgaatgaagacaac
acctacaaccagttctcccacctgcccttcactccacaggagggagacgtttacacctgc
acggtggagcacaagtccctggagacacccgacaccaagacatgggaggtggatgttgag
attcccagtgtgggtccggctgtgttctgtgtagtgggtctggctgtaggactgctcgga
gtcgctactggaactttcttcctcgtcaaaggaaattaa

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