KEGG   Clarias gariepinus (North African catfish): 128530363
Entry
128530363         CDS       T10780                                 
Symbol
ercc6l2
Name
(RefSeq) DNA excision repair protein ERCC-6-like 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
cgar  Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgar03400]
    128530363 (ercc6l2)
DNA repair and recombination proteins [BR:cgar03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    128530363 (ercc6l2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HDA2-3 ERCC3_RAD25_C VIGSSK
Other DBs
NCBI-GeneID: 128530363
NCBI-ProteinID: XP_053360244
LinkDB
Position
9:17154538..17172029
AA seq 1288 aa
MEDNVGLIIEPKRHRMFKVPFEDEKPAFHTNQKPSGPSEPFVLSGTTEVPYTINRYLRDY
QREGVKFIHDSYLKSRGCILGDDMGLGKTIQVISWLAAILQKTGTWQDVENNRPEFLQSQ
APSKVSKVKKMFLIVTPLSVLYNWKDELDTWGHFKTVVVHGVRKEEELGRVNRGRYEIVL
TTFETLRLCLDDFNSLDWAAVIVDEVHKLKNVKSQITQAMKDLKCKVRVGLTGTILQNNL
EELWCVMDWANPGCLGSLGSFVNRFSEPIEQGQKHSATKRELAEGRKAAQALAKILFRWF
LRRTKALIRDQLPKKDDRVVYCSMTDFQQAVYRAVLDTDDVRLLLQSEEKCPCSSGRSRR
KCCFKLNSDGVPARHLYFSYLAILRKVANHVALLQSKEGTSEKQEKYVTAICEQVFKKFP
DFTERCKQAAFEAMSDPVYSGKMKVLQRLLNHFITKNDKVLLFSLSTKLLDVLESYCIAE
GMEYRRLDGSTKAKDRIHIVKEFNSSRDINMCLVSTMAGGVGLNLVGANVVVLFDPTWNP
ANDLQAIDRAYRIGQCKDVKVFRLISLGTVEEIIYLRQIYKQQLQSSVIGNENARRFFEA
VKGVDGQPGELFGIRNLFRLQTDGTCLTRRILEREGHVEVGIMTASIQAMDERVQELKQE
DRPAACGPKVSCSDAEILDFSSASEDENPCGSRSRTIYTNIVEGSGPSSGPAANMNLSAL
LMKHMTNAKQMSSESSEDSTSDTDTKSVNIKETKAGRGKTNWLISSDSEEERNEVKKASD
HIFMEESEDIEILYNSTEAEQLRARASTKKDQRLDLAMLAVQRQRCPEEVKSFDSSEDEA
PVRKIKHKKSVRRNSAQKSDQFTGLKCPTMHSRKPQITESTCTGTLDTLLGGLQEVSYTH
SNQKVVGSSGTENRLSHAALRAVFELNKHSQLPANFLCDISGTQSGIPQLSEPTNGGEEV
ESPESPDKTCLKRQVTHTIQTSLHTKTATVSVGKTPAAVRKQQLEEMAKFFRAKSVQEFA
EELVKSNSAQRLSKLCEFYSNSSPELTDIIQKTFPKPVTEPKLSMSPITAQFSKSRLKST
SKRILLNSVQRPHEEAETGTSQKKRRTKAQSSKDVYHGHAGQTEPKSNRLSLPASERSPK
EKSSAVIRSYFEKNTNLCSISKPTSPTTELSTPSREEQADQNLNTTCISDLIGDTSILDD
LFKQRRNADRQKPATAPIPSPTERTKKRGKDFWDILNEGNEERINKLTDLSQVEKLCRSI
NVCAKSKSESQPESSQLWKKNEKFLWKR
NT seq 3867 nt   +upstreamnt  +downstreamnt
atggaagataatgttggattaatcattgaacccaaaagacacagaatgttcaaggtccca
tttgaagatgagaaacctgccttccatacaaaccagaagccttctggtccctcagaaccg
tttgtcctgtcagggactactgaagtgccatacaccattaacagatatctacgagactac
cagagagagggggttaaatttatccatgacagctatttgaagtccagaggttgcatcttg
ggtgatgacatgggcctgggaaagaccattcaggttataagttggttggctgcaattttg
cagaaaacgggaacatggcaggatgttgaaaataacaggccagagtttttgcagtcacaa
gcaccatcaaaagtgtccaaagttaagaagatgttcctcatcgtgactcccctctctgtg
ctctacaactggaaggatgagctggacacatggggccattttaaaacagtggttgttcat
ggtgtgagaaaggaggaagaattgggccgtgtaaacagaggaagatatgagattgtcctg
acaacttttgaaacactaagactctgtctagatgattttaacagtcttgactgggcagct
gtcattgtggatgaagttcacaagctaaagaatgtcaaatctcagatcactcaggcaatg
aaagatctgaaatgcaaagtacgtgtgggactaactggtacaatcttgcagaataacctg
gaggaactctggtgtgtcatggattgggctaaccctggatgccttgggtcattgggtagt
tttgtaaacaggttctctgaacctattgaacagggacagaaacacagtgcaaccaagaga
gagctggccgagggccgcaaggctgcccaggccctggctaaaattctgtttcgctggttc
ctcaggagaaccaaagcactcattagagatcagctaccaaagaaagatgacagggtggtg
tactgttccatgacagatttccagcaggcagtataccgtgctgtgttggacacagatgat
gtccggttgctgttacagagcgaagagaagtgtccgtgcagcagtggacgctccagaaga
aaatgctgctttaagctcaattcagacggtgtccctgcgagacacttgtacttcagttac
ttggctatactgaggaaggtcgccaatcacgtagctctgctgcagagtaaagaaggaacc
agtgaaaaacaggagaaatatgtaactgctatctgtgagcaagtcttcaagaagtttcca
gacttcacagaaagatgcaagcaggctgcatttgaggccatgtcagaccctgtctacagt
ggaaaaatgaaggtgctgcaaaggctgcttaatcattttatcacaaagaatgacaaagtt
ctacttttttcactctcaacaaagctcctggatgttttggagagctattgcattgctgaa
ggtatggagtaccgcagattggatggaagcaccaaggctaaagatcgcatccatattgtc
aaggaattcaacagcagtagagacattaacatgtgccttgtgtccaccatggctggtggt
gttggactaaatttagttggggctaatgttgttgtcctgttcgatccaacatggaatcca
gcaaatgaccttcaagctatagacagagcgtatcgcattgggcagtgtaaggatgtgaaa
gtttttaggctcatctctctggggacagtggaggagatcatctatctgcgccagatttat
aaacagcaattgcaatcctcagtgattggaaacgaaaatgccagacgcttctttgaggca
gtcaaaggagtagatggccaaccaggagagttattcgggatcagaaacctcttccgcctc
cagactgatggaacttgtcttacacgccgcatcctggagagggagggccatgttgaggtg
gggatcatgacagccagcatacaggcaatggatgagagggtgcaagagctgaaacaggaa
gatagaccagcagcatgtggcccaaaagtcagttgctctgatgctgaaattctggatttt
agcagcgctagtgaggatgagaatccctgcggctccagatcaagaacaatatacacaaat
atagtagaggggtctggacccagctctggccctgctgcaaatatgaatctgtctgctctg
ctgatgaaacatatgaccaatgcaaagcaaatgagctcagagagcagtgaagacagcact
tctgatacagacactaagagtgtgaacataaaggaaaccaaggcaggtaggggtaaaaca
aattggttaatatctagtgactcggaggaagagaggaatgaagtaaaaaaggcctctgac
catatcttcatggaggagtcagaagacatagaaattctctacaattctacagaagcagaa
caactgagagctagagcgagtactaagaaagatcagaggttggatttggccatgttggca
gtacagagacagagatgtcctgaggaggttaagagttttgactcgtcggaagatgaagcc
ccagtgagaaaaataaagcataagaaaagtgtgcgacggaattcggctcaaaaatcagat
cagttcacaggtttaaaatgcccaactatgcattccagaaagccacaaatcacagagagt
acctgcactggcaccctggacactttattaggtgggcttcaggaagtgagctacacccac
tcaaatcagaaagtggtcggctcgagtgggacagagaaccgcctaagccatgctgcttta
cgggctgtgtttgaactgaacaagcactcccaactcccagcaaactttctctgtgatata
tctgggacacagtctggaatcccccagttatctgagcccacaaatggtggagaggaagtt
gaatcgccagaaagtccggacaagacttgtttgaaacgtcaggtcacccacaccatccaa
acttcccttcatactaaaactgcaaccgttagtgtaggcaagacgcctgctgctgtccgc
aagcagcagctggaagaaatggcaaagttcttcagagcaaagtctgtgcaagagtttgca
gaagagcttgtgaagagcaactcggcacagcgactgagcaagctttgtgagttctacagc
aacagcagccctgagcttactgacattatccaaaagacctttcccaaacctgtgactgag
ccaaagctaagtatgtcaccaatcactgctcaattcagtaagtctagactaaagtctacc
tcaaaaagaatcctcttaaactcggttcagagacctcatgaggaagcagaaacgggaacc
tcacaaaagaagagaagaaccaaggcgcaaagttctaaagatgtttatcatggtcatgct
ggtcagactgagcctaaaagcaacaggttgtctttgccagcctcagaacgaagtcccaaa
gagaaatcttctgcagtcattcgttcttactttgaaaaaaatactaatctgtgtagtatt
tcgaaacctacttctcccactactgaattgtcaactccgtcaagagaggaacaagcagac
caaaacctaaacacaacttgcattagtgaccttataggtgacacctccattctagatgac
ctttttaagcaaaggagaaatgctgaccggcaaaagccagcaacagcacccattccctca
cctactgagaggaccaagaagaggggtaaagacttttgggatattttgaatgaggggaat
gaagagagaatcaataaactgacagatctctctcaggtagagaagctttgcaggagtatt
aatgtgtgtgcaaagtccaaaagcgaaagtcagccagaaagctctcaattgtggaagaag
aatgagaaatttctgtggaagagataa

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