Clarias gariepinus (North African catfish): 128531555
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Entry
128531555 CDS
T10780
Symbol
sqstm1
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04137
Mitophagy - animal
cgar04140
Autophagy - animal
cgar04217
Necroptosis
cgar04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128531555 (sqstm1)
04137 Mitophagy - animal
128531555 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
128531555 (sqstm1)
04218 Cellular senescence
128531555 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128531555 (sqstm1)
03029 Mitochondrial biogenesis [BR:
cgar03029
]
128531555 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128531555 (sqstm1)
Membrane trafficking [BR:
cgar04131
]
Autophagy
Mitophagy
Cargo receptors
128531555 (sqstm1)
Pexophagy
128531555 (sqstm1)
Aggrephagy
128531555 (sqstm1)
Xenophagy
128531555 (sqstm1)
ER-phagy
ER-phagy recepters
128531555 (sqstm1)
Other autophagy associated proteins
Midbophagy
128531555 (sqstm1)
Mitochondrial biogenesis [BR:
cgar03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
128531555 (sqstm1)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128531555 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
128531555
NCBI-ProteinID:
XP_053361458
LinkDB
All DBs
Position
10:10648995..10653112
Genome browser
AA seq
456 aa
AA seq
DB search
MSVTIKAYLLGKEDTHKEIRRFAVDHDVSASFEYLSRKVVDVFSNLRNVSFQMYYRDEDG
DLIAFSSDDELMMGLSMVKDDTFRIFIKEKKEHKRDFPHHMDQGFPFTTPPGPHHMGPPG
YPHMAPPHMGPPHMGPPHHQPMVHPGVTCDGCEGQVAGTRFKCTVCPNYDLCSTCQAKGL
HKEHALLPIFHPMANMFEWFPRGKMWRKMRHCMWAGAQAQAQTQAQNQAQPGPSGCQGAS
QQANTQEGQAQNGDSSSQANMEYLKNIGEGVAALLSPLGIDVDIDVEHEGKKAKVTTPSA
ASSGPPSGRSDGSSGGLSKGADGGPSSVGSTNGGTKDQKDQNTDDDWTHLSSKEVDPSTG
ELQSLRMEVDGANDSPAPLSHSTTINPGPSGLREAAVYPHLPQDADPRLVESLSQMLSMG
FTDEGGWLTRLLHTKNYDICAALDTIQYAKSPGQRK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaccatcaaagcttacctcctcgggaaagaggacacccataaggagatccgc
cgcttcgccgtcgatcatgacgtatcggcaagtttcgagtacctgagccgcaaggtggtg
gatgttttctcaaacctccgcaatgtctccttccagatgtactacagagatgaggatggg
gacctgatcgccttctcttctgacgatgagcttatgatgggactgtctatggtcaaggac
gatactttccgcattttcatcaaggaaaaaaaggaacacaagcgtgacttccctcatcat
atggaccaagggttccccttcaccactcctccaggaccacatcacatgggtcctccagga
tacccccatatggctcctcctcatatggggccaccccatatgggtccacctcatcaccaa
cccatggttcaccctggtgtgacttgtgatggttgtgagggacaggtggctgggacccgc
ttcaagtgcaccgtgtgccccaattatgacctgtgctccacctgccaggccaagggccta
cacaaggaacatgctctcctgcccattttccaccccatggccaatatgtttgagtggttt
cctcgtggcaaaatgtggcgcaagatgaggcactgcatgtgggctggtgcccaagctcag
gcccagactcaggctcaaaaccaggcccaacctgggccatctggttgccagggcgcctcc
cagcaggcgaacacgcaggaaggccaagctcaaaacggagactcatcttcccaggccaat
atggagtacctgaagaacattggagagggtgtggctgccttgctgagcccccttggcatt
gacgtggacattgatgtagagcacgagggcaagaaggccaaagtgacaactccatctgct
gcctcaagtggaccacctagtggccggagtgatggtagctctggaggtctttccaagggt
gcagatggaggtccaagcagtgtagggagtaccaatggggggacaaaggatcagaaagac
caaaatactgatgatgattggactcatctgagctcaaaggaagtcgacccatccacaggc
gagctccagtcactgaggatggaggtggatggagcaaatgatagccctgctccactcagc
cacagcaccaccattaacccaggccccagtggtctgcgcgaggctgcagtctatccacat
ctgccacaagacgctgaccctcggctggtggagtccctgtcccaaatgctctccatgggc
ttcacagatgaaggtggttggctgactagactgctccacaccaagaactacgacatttgt
gccgctttggacaccatccagtacgccaagtccccaggtcaacggaagtga
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