Clarias gariepinus (North African catfish): 128531597
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Entry
128531597 CDS
T10780
Symbol
gria2b
Name
(RefSeq) glutamate receptor 2b isoform X1
KO
K05198
glutamate receptor 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128531597 (gria2b)
04082 Neuroactive ligand signaling
128531597 (gria2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128531597 (gria2b)
Ion channels [BR:
cgar04040
]
Ligand-gated channels
Glutamate (ionotropic)
128531597 (gria2b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
128531597
NCBI-ProteinID:
XP_053361546
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Position
10:complement(1770062..1810444)
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AA seq
899 aa
AA seq
DB search
MQQITSCSLLLHLHALFWGCALAGAPSVQIGGLFPRGADQEYSAFRVGMVQFSTPEFRLT
PHIDNLEVTNSFAVTNCFCSQFSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPLD
GMQQFILQMRPDIKGPLLSLIEYYKWDKFAYLYDSDRGLTTLQVVLDTAAERKWQVTAIN
VGNMKDDRKDESYRSLFQDLENKKERRVILDCEQEKVKDIMEQIITIGRHVKGYHYIIAN
LGFVDGDLSKIQYGGANVSGFQIVDFEDPLVSKFDQRWEALEEKEYPGADSKIRYTPALT
FDAVQVMTEAFRYLHKQRIDISRRANNGDCLANPAVPWAQGVEIERALKQVRVEGLTGNI
QFDQYGRRVNYTVHVMELKNNGPVKIGYWNEMDKMAVTKSDLFPNDTMGLENKTVIVTTI
LEAPYVMLKKNADLFVDNERYEGYCVDLAAEIAKHCGFKYRLKIVGDGKYGARDAETKIW
NGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDP
LAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEYEDGQIQTSESTNEFGIFNSLWFSL
GAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAK
QTEIAYGTLDSGSTKEFFMRSKIALFEKMWAYMRSAEPSVFVKTTAEGVMRVRKSKGKYA
YLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLAVLKLSEQGVLDK
LKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGLAMLVALVEFCYKSRAE
AKRMKVTFSDAMRNKARLSVTGSTGENGRVMSPEFPKGVHPVPYVGPDVGMNVSLTDLS
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagataacgagctgctcgcttctcctgcacctgcacgcgctcttctggggatgt
gcgctcgcgggagctcccagtgtgcaaataggcggcctgttccccaggggagcggatcag
gagtacagtgcgttccgggtcggtatggttcagttctcaacgccagagttccgtctcact
cctcacatcgacaacctggaggtgaccaacagcttcgccgtcaccaactgcttctgttcc
cagttctcacgaggcgtttatgccatcttcggattctacgataagaagtccgtgaacacg
ataacgtcgttctgcgggacgctgcacgtctccttcatcacgccgagttttcctctggac
gggatgcagcagttcatcctgcagatgagacccgacatcaaaggacctttactgagcctc
atcgagtactacaagtgggacaagtttgcgtacctgtacgacagcgaccgaggcctgacg
acgctacaggtggtgctggacacggcggccgagaggaagtggcaggtgacggctataaac
gtgggcaacatgaaggacgacaggaaagatgagtcgtatcgctcgctgttccaggatctg
gagaacaagaaggaaaggagagtgatcctggactgtgaacaggaaaaagtcaaagacatc
atggagcagatcataacaatcggcaggcacgttaaaggatatcactacatcatcgccaac
ttgggctttgtggacggagacctgtccaaaattcagtatggtggagcaaacgtgtcagga
ttccagattgtggattttgaagatcctctagtgtccaaatttgaccagcgctgggaagct
ctagaagagaaggagtatccaggagcagacagtaagatcaggtacacaccagcactgacc
ttcgacgccgtgcaggtgatgacggaagcgtttcgttacctgcacaagcaaaggatcgac
atttcgcgcagggctaataacggagactgtctggcgaacccggctgtgccgtgggctcag
ggtgtggagatcgaacgtgcgctaaaacaggtacgtgtcgaaggtctaacaggaaacatc
cagtttgatcagtacggcaggagagtgaattacactgtccatgtcatggagctgaagaac
aatggtcctgttaagattggttactggaatgaaatggacaagatggcggtcacaaaatca
gatcttttccccaacgatacgatgggtctggagaacaagacggtgatagtcaccaccatt
ctggaagcgccgtacgtgatgctgaaaaagaacgcagacctgtttgtggataacgagcgg
tacgagggttactgtgtcgacctggcagccgaaatcgccaaacactgcggctttaaatat
cgcctgaaaatcgtaggagatggaaaatacggagcccgagacgctgagacgaagatctgg
aacgggatggtcggagagctggtttatgggaaagccgatatcgctgtggctccgttgacc
atcacgctggtcagagaggaagtgatcgacttctccaagcccttcatgagcctgggcatc
tccatcatgatcaaaaagccacagaagtccaagccgggcgtgttttcgttcctggaccct
ctggcgtatgagatctggatgtgtatcgtgttcgcctacatcggcgtgagcgtggttctc
ttcctggtcagccgtttcagcccgtacgagtggcacacggaggaatacgaggacgggcag
atccagaccagcgagtctaccaacgagttcgggatattcaacagcctctggttctcgctc
ggagcctttatgagacaaggatgtgatatttcgccaaggtctctttcgggccgtatcgtg
ggcggcgtgtggtggttcttcactctgatcatcatctcctcgtacactgccaacctggct
gcgttcctgactgtggagaggatggtgtcgcccatcgagagcgccgaggatctggccaag
cagaccgagatcgcttacgggacgctcgactccggatcaaccaaagagttcttcatgcga
tccaaaatcgctctctttgagaagatgtgggcgtacatgcgcagcgccgagccgtccgtc
ttcgtgaaaacgactgcagagggagtgatgcgagtgcgcaagtcaaaagggaaatacgcc
tacctgctggagtccaccatgaacgagtacatcgagcagcgaaagccctgcgacaccatg
aaggtcggcgggaacctcgactccaagggctacggcatcgccactcccaagggatcctca
ttaagaacaccagtaaaccttgcagtattgaaactcagtgagcaaggcgtcttagacaag
ctgaaaaacaaatggtggtacgataaaggtgaatgtggagccaaggactcgggaagtaag
gaaaagacgagtgcgctcagcctgagcaacgtggccggtgtgttctacatcctggtgggc
ggtttgggcttggccatgctggtggctctggtcgagttctgttacaagtcgcgcgctgag
gccaagcgcatgaaggtgaccttttcagatgcgatgaggaacaaggcgaggttgtctgtc
accgggagtacaggggagaacggccgtgtcatgagtcccgagttccctaaaggcgtccac
cctgtgccctacgtagggcccgacgttggcatgaacgtcagcttaaccgatctttcgtga
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