Clarias gariepinus (North African catfish): 128535682
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Entry
128535682 CDS
T10780
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04620
Toll-like receptor signaling pathway
cgar04621
NOD-like receptor signaling pathway
cgar04622
RIG-I-like receptor signaling pathway
cgar05168
Herpes simplex virus 1 infection
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128535682
NCBI-ProteinID:
XP_053365709
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Position
13:25188509..25202651
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AA seq
548 aa
AA seq
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MSLLRRVDAREQSFLPLRGGFQDDFVMPPEPKYCCELCRMVLCNPRQTECGHRFCESCIN
QLLSKQNPVCPADMEPLSQDKIFRDVCCHREIMTLKVFCRSAKNGCKEQMCLQQVMDHLN
LCEYFEVPCPLCKEKLMRKDMPEHLSRKCKYREATCEFCKLKMALTELQKHKETVCPAFP
VSCPNHCSFPSILRSELSIHQQDCPKAQVSCSFFRFGCTYKGLNKEMREHESSFASEHLR
LMVARSNTLEAKVEDVKNELLERYKVLPSLSSRLTEVEEQYKDMREKYRQVEQKLSSMQK
LMSAHSEKLLEVEMELRELRPLRAMREEVESLRGAVESMRSVVASFDSVRTGPGTLTLTS
LETQLSRHDELLSVHDIRLADMDLKLQVLETASFNGTLIWKIRDYKRRKQEAVASKTLSL
YSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFRQKVTLMLMD
QGPARKHLGDAFKPDPNSSSFRRPTGEMNIASGCPLFVAQTVLENGTYIKDDTIFIKVTV
DTSDLPDP
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgttgcgccgtgtggacgcgcgggagcagtcctttctcccgctgcgtggtggt
tttcaggacgacttcgtcatgcctcccgagcccaagtactgctgcgagctctgtcgcatg
gtgctatgtaatcctcgccagactgagtgtggacaccgcttctgcgaaagctgcattaac
cagctgcttagtaaacagaatccagtgtgcccagctgatatggagccattatctcaagat
aaaatatttcgtgatgtttgctgccatagagagattatgacattaaaagtcttctgccga
agtgcgaaaaacggatgtaaagaacaaatgtgtttacagcaagttatggaccatttgaac
ttgtgtgagtactttgaggtgccctgtccgttgtgtaaagagaagcttatgaggaaggac
atgcctgaacacttgagccgcaaatgcaaataccgtgaggccacctgtgaattctgcaaa
ctcaaaatggccttaacagagctacagaaacacaaagaaactgtctgtcctgcatttcca
gtatcatgccctaatcattgctcatttccatcaattttacgaagtgagctctccattcac
cagcaagactgtccaaaagctcaagtctcttgttccttttttcgttttggctgcacctac
aagggtctgaacaaggaaatgagagagcacgagtcaagctttgcctcagaacacttgcga
ctgatggtagccagaagcaacacgctagaggccaaggtggaggatgtcaagaacgagctg
ctagaacgctacaaggttctcccgagtctgagcagtcgccttacagaagtggaggaacag
tataaagatatgagggagaaataccgacaggtggagcagaaactatccagcatgcagaag
ctaatgagtgcacactcggagaagctgctggaggtggagatggagctgagggaactgcgg
ccgttgagggcgatgcgtgaggaagtagaatctctaaggggcgccgtggagagtatgcgc
tctgtggtagcatcgttcgactctgtccgcactggtcctggtaccctcacgctgacctca
ttagagacccagctttctcggcatgatgagctgctcagtgtgcacgacatccgtttggcc
gacatggaccttaagctgcaggtgctggagacggccagcttcaacggaactcttatttgg
aagatacgtgactacaaacggcgcaaacaggaggcagtggcttccaaaacattgtcgctt
tacagccagcctttctacaccggctattttggctacaaaatgtgtgctcgtgtttacctg
aacggtgatggcatgggaaagggcacacacctgtcacttttctttgtggtgatgcgcggt
gagtatgatgcgctgctgccatggcctttccgccaaaaggtgacactcatgctgatggat
cagggtcctgcacggaagcacctgggtgatgctttcaagcctgatccaaacagcagcagc
tttcggcggcccacaggggaaatgaacattgcctcaggctgtccgctgtttgtcgctcag
actgtgctggagaacgggacatacatcaaagatgacaccatattcatcaaggtcacagtg
gacacctcagacctacctgacccatga
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