Clarias gariepinus (North African catfish): 128536376
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Entry
128536376 CDS
T10780
Symbol
wdpcp
Name
(RefSeq) WD repeat-containing and planar cell polarity effector protein fritz homolog isoform X1
KO
K22863
WD repeat-containing and planar cell polarity effector protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgar03037
]
128536376 (wdpcp)
Cilium and associated proteins [BR:
cgar03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
128536376 (wdpcp)
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Gene cluster
GFIT
Motif
Pfam:
Frtz
CdiI_2
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
128536376
NCBI-ProteinID:
XP_053366581
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Position
13:complement(5676230..5759800)
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AA seq
740 aa
AA seq
DB search
MVIISKPKHLTSHPRDWRRLCHLMAFCLAELNLWSSRSSLNVQDTDIGTFQFYEKGEPVL
PADQHYYSEKQHFAETRGYPWFLSNRRPERLRDTLKELEELLQSNSCVCTKWRTKRCCQM
LLSSGVLVTLTLSGAQLERVGIDKTLVGRLPADTISHAAIGERFLLLSFVEKSQVCQVHL
GRRSQSSPELSARRLEKLSAADIKVSCLELAGGGGRRTSRRVALNRAQDMGVCWWQGGHD
EVWPWSPVPSASERANLVLLGFSESPGLMVLSSICTSGEPLDCCFSLTQPYQILTMELHK
EACGSIGGLHVEPNQSNIEPREEAQVAQTCVYECARGRLQHLSATSLPLSSVPVSWCRDP
SECWILLGLQDSSVVLIHIKTGLQTRVTCPMLPSVLAWHPDGGMIVVAGGQGELQCFDLG
LSPLRLQLVSEDNVSSTSLQLARHVRIPGGLESVEWAHSAVPQGAEGLEVHNLLMLRFHK
GPVAALRLRLGVLNGAQLGAGELLQHRLRCGQVDAALGILGNMDWCMMGADCYRGLISVT
DHLLRKPLDEQTEEAQLEAALGMFYSPSRALTETVILEYRDPISRYARRFFHHLLRHQRF
EKAFLLALDIGARDLFMDLHYVARDSGEPVLANVAQRKAQELDADEVTTSDPDEPKPARN
GVCISPSNTHTERPNSSKAHRNARGDSKEKMDREMDGDLTEATVNPVIWPWIQTELACID
HNDQESKDPGKLKVIHLGLV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcatctccaaaccaaaacatctgacatcacacccaagggactggaggcgtctg
tgtcatctgatggcgttctgcttagccgagctgaacctgtggtcctcaaggagcagtctg
aatgtgcaagatacagatattggcacgttccagttttatgagaaaggggaaccagtcctt
cctgcagatcagcattactacagtgagaagcagcactttgccgagacacggggttaccca
tggttcttgagtaaccggcgtccggagaggttgcgggacaccctcaaggaactggaggag
ttgttacagtctaattcctgcgtttgtaccaaatggaggacgaaacgttgttgtcagatg
ctgttgagctcaggtgttcttgtgaccctcactctaagtggagctcagttagagagagtg
ggcatcgacaaaacacttgtgggacgacttcctgctgacaccatcagccatgcggcgatt
ggcgaacgcttcctcctcctctcgtttgtggagaagagtcaggtgtgtcaggtgcacctg
gggaggcggagccagagttcacctgagctctcagcacgccgtttggagaaactctcggct
gctgacatcaaggtctcgtgcttggagctggcaggaggcggcggccgtcgcacgagcagg
cgtgtggccctgaaccgtgcgcaggacatgggtgtgtgctggtggcaaggcgggcatgac
gaagtgtggccttggtcaccagttcccagtgcctcagagcgggccaatctggtactgctg
ggcttttcagaaagccctggtcttatggttctgagctccatatgcaccagtggtgaacct
ttggactgttgcttcagcctcacccaaccctaccagatcctcaccatggagctgcacaaa
gaggcctgtggctctattggagggttacatgtggagcccaatcaatctaacattgagccg
cgtgaggaggcccaagtcgcgcaaacatgtgtgtatgagtgtgctcgtggacgtctgcag
cacctctcggctacatctttacctctgtcttctgttcctgtgtcctggtgccgtgaccca
agtgaatgctggattttgttgggccttcaagactcctctgtggttctgatccacatcaaa
actggcctccagactcgtgtcacctgccccatgctgccttcggtactggcctggcaccca
gatgggggcatgattgtagtggctgggggtcagggtgagctgcagtgctttgatttggga
cttagccctctccgactacagctcgtgtccgaggacaacgtcagcagcacaagtctgcag
ctggccaggcatgtgagaatacctggtgggttggagagtgtggagtgggcgcactcagca
gtgccgcagggtgcagaggggctggaagtgcacaatctcctgatgctcaggttccacaaa
ggtccagttgctgctctgagactcagactaggtgtattaaatggagctcagctgggtgcg
ggtgaactcctgcagcatcgtcttcgctgtggacaggtggacgctgcactgggcattctg
ggtaatatggactggtgcatgatgggagcagactgctatcgtggtctcatttcagtgaca
gatcacctgctgagaaaacctctggacgagcagactgaagaagctcagttagaagccgct
ctggggatgttctactctccctccagagccttaacagagacggtcatcctggagtatcga
gacccgatcagccgctacgcacggagattctttcatcaccttctcaggcaccagcgcttt
gagaaggcgttcctgctggctctggacatcggagcccgagaccttttcatggatctccat
tacgtggcacgggacagcggggagcctgtgctggccaacgtggcccaacgaaaggctcaa
gagctggatgcggatgaggtcacgacctctgacccagatgagcccaagccagcacggaat
ggagtgtgtatctcgcccagtaacacacacacagaacggcccaactccagtaaagcacac
aggaacgcaagaggtgactctaaggaaaagatggacagggagatggacggagacctcacc
gaggcaacagtaaatcctgtcatctggccctggattcaaacagaattggcgtgtatcgac
cataacgatcaggaatccaaagaccctggaaagctcaaagtcattcatcttggcttagta
taa
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