Clarias gariepinus (North African catfish): 128541353
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Entry
128541353 CDS
T10780
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04140
Autophagy - animal
cgar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128541353 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128541353 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128541353 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
128541353 (plekhm1)
Membrane trafficking [BR:
cgar04131
]
SNARE
SNARE associated proteins
Others
128541353 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
128541353 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_13
Motif
Other DBs
NCBI-GeneID:
128541353
NCBI-ProteinID:
XP_053367706
LinkDB
All DBs
Position
14:7824338..7845139
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AA seq
1007 aa
AA seq
DB search
MIATQLADSALEAKNVKQWIKEKIAQTLKVLQKRYVTTDAPVTSEDSEANLLCCALEAVF
IHGLRSKHIRTDGAGARNRKGNSLPQPIFWNLLKTITHRDVILEIEGLSFINSDVGRCRA
WMRLALNDGLLECYLFSLFRESTNLGAHYQPGALLLDTEEREVLLSLLQGLASLSFQLSY
KSAVLNEWTTTPLALAGLCPPLSTDDDPQPPSSRRESWDTASQSSGSGGSGRGQEDRTPS
DLSLDTVGSSHLSSSFGSERESWNCHVENKSTHEDSSSQDIKDLDLPSPASDSVIEFSTH
SSSDEDSSNKQDILQMLEPPTDSSDPGCYSVVLEQAPLGEEFLKLANGLVNMKQKDTESF
IVEDQKQDEGSPDIPLDTSTPMLTCQDLTSESLPPNTLDPSISREAEFVNNLEPASVHHT
ALSSKISTGSVCSHHKSRSWISDEDIYKPDTYASGGSEELEDVESTQINGTPSPVTEPES
MTSPPSVVRRRQIGLSNPFRGLLKLGQLERRGPVGLWRACHCELSPFELRLYSDDEERNI
CENRSLLRCEDVHLGSDGRFHLEFAGKKLQLRAPSKPEAEDWVERILEAVSNVRHDPREE
WDDLSPSIMPVSRPPETSNLPETDWNRPCEAEPDAIKEAVVLLSREEQSWCSMVLCLSLE
ALQGFSVENGCKTQLFSYGIDAVRDVVPAAALGSPAFFKVLTAKGTLTVRAECDEEARTW
RSLIRWALDSYLEEENETGGEMTSLSGNIQRLVHHRLKGDAVLLPYLTSVPKEKGLNAQS
FKCAGCSRQIGVSLGRARLCEFSGQYYCESCHQGDTSIIPSRMVHNWDLTAREVSRQALK
LLTDIEHEPLMNLDLLNSDLFDHTETMATVQCLRQRLRLLGDYLLICRSGIRKKVEARLQ
QRTYLLESSDLYSVLDLRQIADSQYESFLQSLIQFACNHVHHCDLCTQRGFICQICNADD
IIFPFQFDTTSRCKVCKTVFHSSCKAQCVTCPRCERLQRYKEREFLK
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcaacacagctcgctgactctgctctagaggccaaaaatgttaaacagtggatc
aaggaaaagatagcccagacactgaaggtgttgcagaagcgctatgtgaccaccgatgca
ccggtgaccagcgaggactctgaggccaacctgctctgctgtgccctggaagccgtcttc
atacatggcctccggagtaaacacatccgcacagatggcgcaggagcacgcaaccgcaag
ggaaactcgcttcctcagcccatcttctggaatctgcttaaaaccatcactcacagagat
gtgattctggagatagagggcttgagcttcatcaactcagacgtaggccgttgcagggca
tggatgcgcttggcactgaatgatggactattggagtgctaccttttttcattatttcgt
gagagcaccaacctgggagcacactaccagcccggtgcattgcttctcgacactgaggag
cgtgaggtgctgctcagccttctgcagggcctggcctcactctctttccagctttcctac
aaatccgcagtgctgaacgagtggaccactacacccctggcactcgccggtctctgtccg
ccactgtctactgacgatgacccgcagcctccttcgtcacgtagagaatcctgggataca
gcatcacagtcatctggatctggaggttcaggaagaggtcaggaggacaggacgccgtca
gacctcagcctggacaccgttggctctagccatctttcttccagctttggttcggagaga
gagagctggaactgccacgtggagaataagagcacacatgaagactcctctagtcaggat
ataaaagacctagatctgcctagccctgcttcagacagcgtgatcgagttctccactcac
agcagcagtgacgaagactcctctaacaaacaggatatactccaaatgcttgaacctcct
acagattcatctgaccctggttgttactcggttgttttggagcaagcaccattaggagag
gaatttttaaagcttgcgaatggacttgtaaatatgaagcaaaaagatactgagtctttc
atagtagaagatcagaagcaagatgaaggctctcctgacattcccttagatacctccact
cctatgttaacctgtcaggatctgacttctgaatcattgcctcccaacactctcgatcca
tcgatttccagagaagccgagttcgtaaacaatttagagcctgcttctgtccatcatact
gctctaagcagtaaaatatccacaggctctgtctgttctcaccataagtccaggtcctgg
atctcggatgaggatatttataagccagatacgtatgcaagtggtggttctgaagagctt
gaagatgtcgaatccactcagattaatggcacgccatctcccgttactgaacccgaatca
atgacatctccacctagtgtcgttcgtcgtagacagatcggcttgtcaaacccctttcga
ggtcttctaaagctcggccagctggaacggcgaggccctgtgggtctgtggcgtgcctgc
cactgcgagttgtcaccatttgagctgcgcctatattctgatgacgaagagcgtaacatc
tgtgaaaaccgctctctgttgcgttgtgaggatgtgcacctcggctcggatggccgcttc
catctcgaattcgccggaaagaagctccagctgcgagcaccgagcaagcccgaggccgag
gactgggtggagcgcattttagaagctgtgagcaatgtgcggcatgacccgcgcgaagaa
tgggatgacctctcgccttccataatgcctgtctctagaccccctgagacatctaatctg
cctgagaccgactggaacaggccctgtgaggcagaacctgatgccataaaggaggcggtg
gtgctcctgagccgggaggagcaaagttggtgttcgatggtgctctgtctctccctggag
gcgcttcaaggcttttctgtggaaaacgggtgtaaaacacagcttttctcttatggcatt
gacgcagtgagggatgtggtccctgcagcagcacttggcagccctgcgttttttaaggtg
ctgacggcaaaggggacgctgaccgtgcgggccgagtgtgacgaggaggctcgtacctgg
aggagtctcattcgatgggcgttggattcttacctggaggaggagaatgagacaggaggt
gaaatgacatcactgagtggcaacatccaaagacttgttcaccacaggttgaagggggat
gcggtgctgctgccctatctgacatctgtccctaaagaaaaagggctaaatgcacagagc
ttcaaatgtgcaggctgttccaggcagattggagtatctttgggacgagcgaggctgtgc
gagttctcgggtcagtactattgcgagtcctgtcaccaaggtgacaccagcatcatcccc
tctcgaatggttcacaactgggatcttactgcccgcgaggtctccaggcaagcattaaag
ctgctgactgacattgagcacgagccattgatgaatcttgaccttttgaactctgacctg
tttgatcacactgaaaccatggcaacagtgcagtgcttaaggcagcgactccgcctactt
ggggattatctcctaatttgtcggagtggaatccggaaaaaagtcgaggctaggttgcaa
cagagaacctacttattggaatcaagtgatctatatagtgtgctggatctcaggcagata
gcggacagccagtacgagtccttcctgcagtctctcatccagtttgcgtgcaatcatgtg
catcattgtgacctctgcactcagcgaggcttcatctgccagatctgcaacgcagacgac
atcatttttccttttcagtttgacaccacctccaggtgtaaggtgtgcaaaacagttttc
cactcctcctgtaaagcccagtgtgttacttgtcctcgctgtgaacgactacagagatat
aaggagagagaatttcttaaataa
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