Clarias gariepinus (North African catfish): 128541537
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Entry
128541537 CDS
T10780
Symbol
mtr
Name
(RefSeq) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00270
Cysteine and methionine metabolism
cgar00450
Selenocompound metabolism
cgar00670
One carbon pool by folate
cgar01100
Metabolic pathways
cgar01230
Biosynthesis of amino acids
cgar04980
Cobalamin transport and metabolism
cgar04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
128541537 (mtr)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
128541537 (mtr)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
128541537 (mtr)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
128541537 (mtr)
04980 Cobalamin transport and metabolism
128541537 (mtr)
Enzymes [BR:
cgar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
128541537 (mtr)
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GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CdhD
IPT
Motif
Other DBs
NCBI-GeneID:
128541537
NCBI-ProteinID:
XP_053367979
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All DBs
Position
14:25400076..25433991
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AA seq
1265 aa
AA seq
DB search
MGPTVQFETGTGPGAASLEAELRDVLQKRIMVLDGGMGTMIQQRNLQEDDFRGQEFKDHP
RSLKGNNDLLSITKPEVIYAIHKEYLLAGADIVETNTFSSTRVAQADYGLEELAYQLNKA
SAELARKAADDVSTQTGVKRYVAGAVGPTNRTLSVSPSVERPDFRNITFDELVEAYSEQV
QGLLDGGCDILLVETIFDTANAKAALFAIDKLFEESYEPRPIFISGTIVDKSGRTLSGQT
GEAFVISVSHVKPLCIGLNCALGATEMRPFIETIGKSTGAFVICYPNAGLPNTFGGYDET
PECTATHLKEFATDGLVNMVGGCCGTTPDHIRAIAEAVKQCQPRVPPSDVFSDYMLLSGL
EPFRIGPYTNFVNIGERCNVAGSRKFAKLIMSGNYEEALTVAKAQVEMGAQVLDINMDEG
MLEGPVAMARFCNLIASEPDIARVPLCIDSSNFAVIEAGLKCCQGKCIVNSISLKEGEEA
FLKRAKQVHRYGAAVVIMAFDEEGQATEIDQKVQICTRAYHLLTKKVGFNPNDIIFDPNI
LTIGTGMEEHNMYAINFIKATRIIKESLPGARVSGGLSNLSFSFRGMDAIREAMHGTFLY
HAIKDGMDMGIVNAGSLPVYDDIDKELLLLCENIIWNRDPEATEKLLLYAQNKAKGGKKV
IQTDEWRKGSVEERLEYALVKGIEKFVVEDTEEARAQTDRYARPLHVIEGPLMNGMKCVG
DLFGAGKMFLPQVIKSARVMKKAVAHLIPFMEKEREEMMAQSGVPDDLDPYQGTIVLATV
KGDVHDIGKNIVGVVLGCNNFRVIDLGVMIPCDQILKAAIDRKADIIGLSGLITPSLDEM
IHVAKEMERLGMKIPLLIGGATTSKTHTAVKIAPRYTAPVVHVLDASRSVVVCSQLLDEG
VSEDFFEEVTEEYEEIRQDHYDSLKDRRYMSLAQAREKGLHIDWLSQPPPDQPKFLGTRV
FDAYDLRKLVDFIDWKPFFDVWQLRGKYPNRGYPKIFNDKTVGEEARRVFDDAQSLLKRL
IDSKGLQARGIVGFWRAQSHGDDILVYVDDVTPTLSNHTATFYGLRQQVEKDSASSEPYL
CLSDFVAPLESGVQDYVGLFAVGVFGAKKLSQEFEQQGDDYNSIMVKALADRLAEAFAEE
LHARVRKEFWGYSEEGDLPAGDLHKLRYSGIRPAPGYPSQPDHTEKCTMWRLAQIEEKTG
ICLTESLAMTPAAAVSGLYFSHTKSTYFSVGKITKEQVEDYARRKQISVTEVEKWLGPNL
AYDTD
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgggaccgacagttcagtttgagacaggaacaggtccaggagctgcttccctagaggcc
gagctcagagatgtgctacagaagaggatcatggtcctggatggaggaatggggacgatg
attcagcagaggaacctgcaggaagatgacttccggggtcaggagtttaaagatcaccca
cgaagcctgaagggcaacaacgacctgctgagcatcaccaagcctgaggtcatctatgcc
atccacaaggagtacctgcttgctggtgcagatatcgtagagacgaacacgttcagcagt
acacgcgttgctcaggcagactacggactcgaggagctggcctatcagcttaacaaggcg
tcggcggagttagcccggaaggctgcggatgatgtgtccactcagacaggtgttaaacgg
tacgtggctggagctgtagggccgaccaacagaactctctctgtgtccccgtcagtggaa
agacctgacttcagaaacatcacgtttgatgaactggtggaggcgtactcagagcaggtt
caagggctgctggatggaggctgtgatatcctgttggtggaaaccatttttgatacagct
aatgcaaaggctgccctgtttgctattgataaactgtttgaggagtcgtacgaaccaaga
cccatatttatttccgggactattgtggacaagagtggccgtactctatcggggcagacc
ggagaggcttttgtcatcagtgtgtctcatgtaaagccactctgtattggtttgaactgt
gctctgggagccactgaaatgaggccgtttatcgaaacaatcgggaagagcaccggggct
tttgtcatatgttaccccaatgcaggtctccccaacaccttcggaggctatgacgaaacc
ccagagtgcaccgcaacacatttaaaagagttcgcaacagacgggctggtgaacatggtc
ggaggctgctgtggaacaacaccagaccacatacgggcaatcgctgaggcagtgaaacag
tgccagcccagagttcctccatctgacgtgttcagtgattacatgctgctctctggtctg
gagccgtttcggatcgggccgtacaccaactttgtcaacatcggcgagcgctgcaacgta
gctggatcacgcaagtttgccaaactcatcatgtctgggaattatgaggaggcgttgact
gtagctaaagcacaagtggaaatgggcgcccaggtgctggatatcaacatggacgaagga
atgttggagggacccgttgccatggcgcgtttctgcaacctcatcgcctcagagcccgac
atcgccagagtgcccctgtgcatcgactcgtctaattttgcagtgattgaggcaggtctg
aagtgctgccagggcaagtgcatcgtcaacagcatcagcctgaaggagggagaagaggct
ttcctcaaacgcgccaaacaagtgcatcgctacggtgccgctgtcgtcattatggccttc
gatgaagaaggccaggctactgaaattgatcagaaggtccagatctgcacaagagcttat
cacctcctaaccaaaaaggtcggctttaaccctaatgacatcatcttcgaccccaacatc
ctgaccataggcaccgggatggaggagcacaacatgtacgctatcaacttcatcaaggcc
acacggatcataaaggaatctttgcctggagcccgagtcagtggtggtttgtctaatttg
tccttctcctttcgaggcatggatgccatcagggaggccatgcatggcacatttctctat
cacgctataaaggacgggatggacatggggattgtgaatgctggttctctgcctgtgtat
gacgacatcgataaagagctgctccttctgtgtgagaatatcatctggaaccgagaccca
gaggctacagaaaagctcctactatatgctcagaacaaggctaaaggtgggaagaaggtg
atccagactgacgagtggagaaaaggaagcgtggaggagagattggagtatgcacttgtt
aagggtatagagaagtttgtagtggaggacacagaagaggctcgtgctcagacagatcgt
tatgcccgaccgctgcacgtcatcgaggggccgctcatgaacggcatgaagtgtgtagga
gatctgttcggcgctggaaagatgttcttaccacaggtgataaaatctgcccgggttatg
aagaaggctgtggcccatctgattccctttatggagaaagaaagggaggagatgatggct
cagtctggagttcctgatgacttagatccttatcagggcacgatagttctggcaacagta
aaaggagatgtccatgacatcggcaagaacattgtgggcgtcgtgctggggtgcaacaac
tttcgagtgattgatttaggagtaatgataccatgtgatcagatcctgaaggcggccatt
gacaggaaagcagatattatcggtttgtcaggcctcatcacgccgtcccttgatgagatg
attcatgtggcgaaggagatggaacgtcttggcatgaaaatccctctgctgatcggagga
gccacaacttcaaagactcatactgcggtaaagattgcccctcgatacactgctcctgtt
gttcatgtccttgatgcgtctcgtagcgttgtggtgtgttctcagctgttggatgaaggg
gtgagtgaggatttcttcgaggaggtaacggaggagtatgaagagatcaggcaggatcac
tacgactctcttaaggataggcgatacatgtctctagcacaggcacgggaaaaaggccta
cacatcgactggctctcacagccaccaccagatcagccaaagttcctgggcacacgtgtg
tttgatgcatatgacctaaggaagctggtagatttcatcgactggaaacccttcttcgat
gtgtggcagctgagggggaaatatcccaaccgaggctaccccaaaatcttcaatgataaa
accgtgggagaagaggccaggcgcgtgtttgacgatgctcagagtcttcttaagaggctg
attgacagtaaaggtcttcaagcaagaggcatcgtgggcttctggcgtgcacaaagccat
ggcgatgacattctcgtatacgtcgatgatgtcactccgactttatctaaccacaccgct
accttttatggacttagacagcaggtggagaaggactcggcaagttccgagccgtacctg
tgtttgtcggattttgttgctccgttggaaagcggtgtgcaggactacgttgggctcttt
gcagtcggcgtgttcggtgccaaaaagctcagccaagaatttgagcagcagggggatgat
tacaacagcatcatggtgaaagctcttgctgaccgactcgctgaggcatttgctgaggag
ctccatgctcgtgtgaggaaggagttttggggttacagcgaagagggcgatctgccggcc
ggtgacctccacaagctgcgttactcagggattcgacccgctccaggctaccccagccag
cccgaccacaccgaaaaatgcaccatgtggcgactcgcccaaattgaggagaaaactgga
atttgtctgactgaatcacttgccatgactccggctgcagctgtatctggtctctacttc
tcccacaccaaatccacatacttttctgtgggcaagatcaccaaggaacaggtggaagat
tatgccaggagaaagcagatttctgtgactgaggtagagaaatggctgggacccaacctg
gcctacgacacagactaa
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