Clarias gariepinus (North African catfish): 128541704
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Entry
128541704 CDS
T10780
Symbol
lgi1b
Name
(RefSeq) leucine-rich glioma-inactivated protein 1b
KO
K25428
leucine-rich repeat LGI family member 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
128541704 (lgi1b)
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GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRR_9
LRRCT
DUF6198
Motif
Other DBs
NCBI-GeneID:
128541704
NCBI-ProteinID:
XP_053368229
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Position
14:7951393..7958299
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AA seq
545 aa
AA seq
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MGDDGASWRGFSLTLLCAAALFLSAESRRGNKQPRCPAGCTCTKDNALCESIKSVPHTFP
PDVVSLSFVKSGFTEIAPGSFLHAPSLQLLLFTSNTFDLINEDAFQGLPHLEYLFIENNK
IGSMSPLAFRGLKSLLHLSLAYNNLEMLPKDVFKGMDALTKVDLRGNMFICDCKLKWLVE
WMHNTNATVDQIQCNGPPHYQGKKINELMPQAFDCITAEFVSKKTLKFESISVETFTLGN
DQYAVFAQPFSGTCSFMEWDHVNMEFRPYDNIESTSTVVCKPMVIDDQLFIIVAQLFGGS
HIYKRDTSAHKFIKIQDIDILKIRKPNDVETFRLDGEWFFAIADSSKAGSTTVYKWNGNG
FYSHQSLHPWHRDTDVEYLEIAGKPHLILSSSSQRPVIYQWNWSQKRFERRTDIPETEDV
YAVKHFRVRGELYICLTRFIGDSKVMRWDGAMFTEVQSVPSRGSMVFQPVTIGNWQYAIL
GSDYSLTQVYRWDSKKGLFVHFQELNIQAPRAFSLVSIDNHELLLASSFKGRTQIYEHLI
IDLSN
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgacggcgcgtcatggcgcggcttcagtttaacgctgctttgcgcggccgcg
ctctttctctccgcggagagccgcaggggcaataagcagccccgatgccctgcaggatgc
acatgcaccaaggacaacgctttgtgcgaaagcatcaaaagtgttccgcacaccttcccc
ccggacgtcgtctccttatccttcgtcaagtctggattcactgaaatcgccccgggaagc
ttcctgcacgcgccgtctcttcagctcctcttgtttacatccaacactttcgaccttatt
aatgaagacgcgtttcagggcctgccacatctggagtacctttttattgaaaacaacaaa
attgggtccatgtcacctttggcttttagaggtttgaaatctctcctccatctgagcctc
gcctataataatcttgagatgttacccaaagatgttttcaaggggatggacgcgctaaca
aaagtggatcttcgaggaaacatgtttatctgtgactgtaaactgaaatggctcgttgaa
tggatgcacaacaccaacgcaacagtggaccagatacagtgtaatggaccaccacattat
caagggaaaaagatcaatgagctgatgccgcaagcgtttgactgcataactgcagagttt
gtttctaagaaaaccctgaagttcgagtctatttcagtagagacgttcactcttgggaac
gatcaatatgctgtgtttgcacagcctttttcaggaacatgtagcttcatggaatgggac
cacgtcaacatggagtttagaccttatgacaatattgagagcacctccactgtagtctgt
aagccaatggtgatcgatgaccaactgttcattattgtcgcgcaactttttgggggttca
cacatttacaaacgggatacatcagcccacaagttcatcaagatccaagacattgatatc
ttgaagatccgcaaacccaatgacgttgagacgttccgtttggacggtgagtggtttttc
gccattgctgacagctccaaagcaggttctactactgtgtacaagtggaacggcaatggc
ttctactcgcaccagtctctgcacccatggcaccgagacacggacgtggagtacttggag
atcgctggcaaaccccacctgatcctgtccagcagctcacaacggccggttatttatcag
tggaactggagccaaaagaggtttgagcggcgcacggacatccctgagactgaggacgta
tatgccgtaaagcacttcagggtcaggggcgagctttatatctgcctgacacgtttcatc
ggtgactcgaaggtgatgcgttgggacggcgccatgttcacagaggtgcagagtgtacca
tcacgtggctccatggtctttcagcctgtgacaattggaaactggcagtacgctatcctt
ggcagtgattactctctcacgcaggtctaccggtgggactccaagaagggcctatttgtg
cacttccaagagttgaacatccaagcaccaagggcgttctctctggtatccattgacaac
catgagctcctgctcgcctccagtttcaaagggaggacacagatctacgagcacctcatc
atcgatctgagtaattga
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