Clarias gariepinus (North African catfish): 128541749
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Entry
128541749 CDS
T10780
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00514
Other types of O-glycan biosynthesis
cgar04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
128541749 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128541749 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cgar01003
]
128541749 (rfng)
Enzymes [BR:
cgar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
128541749 (rfng)
Glycosyltransferases [BR:
cgar01003
]
Glycan extension
O-Glycan
128541749 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
128541749
NCBI-ProteinID:
XP_053368287
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All DBs
Position
14:6573090..6581935
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AA seq
367 aa
AA seq
DB search
MQLSPVGTNRRCFLASSALCAIVLLLIPALQTTQRPGELPRPFPHTRPARGENTTVYKGA
SNSKHSRVSGITFPRDKSQRHSIDADYRVSSRSKEPLGLKDIFIAVKTTRKYHKSRLELL
FQTWVSKAREQTFIFTDGEDKELKQKAGGNIINTNCSAAHTRQALCCKMSVEYDKFIESQ
KKWFCHVDDDNYVILPSLLKLLSYYSHTQDVYLGRPSLDHPIEAPERVRSDGSTSVNFWF
ATGGAGFCISRGLALKMSPWASLGNFITTAEKIRLPDDCTIGYIIEALLEVPLIHSNLFH
SHLENLQRMRSVDVLQQVTLSYGGFENRRNVVPIAGVFSLAEDPSRFKTVHCLLYPETEW
CLRNSRH
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgtctcctgttggcacgaacagacgttgcttcttggcctcctcggcactctgc
gccatcgtgctgctcctgatcccggctctccaaacgacgcagcggccgggcgagctgccc
cgaccttttccccataccaggcctgccagaggagaaaacactacagtgtacaaaggtgcc
agtaactctaagcacagcagagtatctgggataacatttcctagggacaaatcccagaga
cactcgatagatgctgactatcgggtcagttcacggtctaaggagccgctgggactgaaa
gacatttttatcgcagtcaaaaccaccagaaagtatcacaaatcacggctggagctgctt
tttcagacctgggtgtcgaaagccagagagcagacatttatcttcactgatggtgaggat
aaggagctgaagcagaaagcaggaggcaacatcatcaacaccaactgctcagctgctcac
acgcgacaggcgctgtgctgcaagatgtccgtggagtacgacaagttcatcgagtcacag
aaaaagtggttctgtcatgtggatgacgataattatgtcatcctgccgagtttgctgaag
ttgctgtcgtactactcccacacacaggatgtgtacctgggccggcccagtctcgatcat
cctatagaggctcctgagagggtcaggagtgatggatcgacatctgtcaatttctggttc
gctactggaggtgctggtttctgtatcagtcgagggctggcactcaagatgagtccgtgg
gcaagtctggggaacttcatcactacagcagagaagatccgtctcccagatgactgcacg
attggttacataatcgaggcgctgctggaggttcctctgatacacagcaacctcttccac
tcacatctggagaacctgcagagaatgcgttcagtggacgtccttcaacaggtcaccctc
agctacggtggttttgagaaccggaggaatgtagtacctattgctggggtgttctcctta
gctgaagacccttcacggtttaagaccgttcattgcttgctttatcctgaaactgaatgg
tgtcttcgcaacagccgtcactga
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