Clarias gariepinus (North African catfish): 128542609
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Entry
128542609 CDS
T10780
Symbol
wu:fi04e12
Name
(RefSeq) desmoplakin-B isoform X1
KO
K10381
desmoplakin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04820
Cytoskeleton in muscle cells
Brite
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
128542609 (wu:fi04e12)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128542609 (wu:fi04e12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128542609
NCBI-ProteinID:
XP_053368515
LinkDB
All DBs
Position
2:39346980..39373150
Genome browser
AA seq
2672 aa
AA seq
DB search
MSIYRSQRSFSRRSRSRSSSRSDVAVSNYHLSGNGFGPESVEDMNYNFSKSSMGGGQGPP
QHLIIYQRASILQGQCQEFLSKAEFILQTETDRARATAEAEHCVMSAGDIIEHLKGFALE
LRELGQPNESVLMTVEECTEHLRAVHMALGGSLQRNSRSSRSSMGWDEMDRNLQDALAWI
AQQKGVIETSPWGDEPSVIEQHIMNHNKFHSSIQRSVEMDRARGELRERRDKASLHLLEQ
EWDSLQKMSVERGAHLHELQKIIDEITREIMWVNEKEEEELMFDWGNRNIDVYIPKKQES
YSMLMSDLEEKEKHLNKLKLKVDNLLASNHPALDKIEAYMETLQTQWSWLLQITKCIHVH
LKENAAYNQFFIEANETNRRLQQQHEMIRKKFACDKMTPLPNLQELLKVLEKEQDYLLEH
KQQVQQLVNKSKNIVRLRPRNPEEKSTSPVKVQALCDFRQDQKVICKGDMAILKDNSERS
KWLVTGPGGLDMEVPSICLIVPPPNPLSISLASKNEQYYEALQSVWNQLFINIKSLISWQ
YCLHDISRINSLTITILTQMRPEQYRSIMKSLEFHYQEYQRNCSGSEMFEEDDKKAIESQ
YNGAQQHYDNLVEQLPAYNKEVVTGVSVLSELHALQLKLHALESALGTHQHIPMGQGAPA
QYTSLITGTQATMRDVESLRGEFQRLKGPVLTELEATRDTDKAQFLQSQLNLINQRLDKL
RSHSSTYLQRLKALKSLHQVLLQAEDVVKVNETRLTERETTSLEPAEVQEYQNTLRVMRS
ELDQKEGVLHSLEDEMIKARQCNEQIDQNCHRCDVDLCLYSEHVKQLSDRWKRIQTQINS
RYSDLETYLQQLKYYLNSSSALTTWINDTKRRTEPQLSAKTDDITLVNKLLTQQKALNSE
ITAKRETMDAVQRDGDTCVNTIKDYELGLASYSAGLETLLNIPIKKSMLQSPATVVIEEV
SSLHSRYSELLTRSSDYCKFLGDSLKNLEELKIRNTKIDMLEEELRLLRADIEDRNAKNV
SLQEALSRYQLKLNESQEHLLSLEEVKRNQALKCTTVQANLSSSQNRLQELTDEVRRLKM
LVEEEKRNRKIVEERYSSQQDDHEGAMRKRLKELEGANWAKIELEQAVSERTRELEHVRR
QLEEETKNLKQTQMELAKVRQQHSTEMREVKQTYESQILVTQTNIQMLSKQRKDDSVSMQ
MECSRVEGECKKLQEELRKVQHAFSEEQAQRRHAEVMLQQQVQAGTEEARKRSELEAQIQ
QILSQQSAEESRWKGVQAQSTKSLQEKNTQISNLRQSLDDDMHKRRALEAENGHLQKELA
DLHAKHTTSSQELIKLRSSHQELSILRVELESQGNERNRAELKMAHLQVRVQELQEELKE
LDGQMNQQIKVAQDEAAKRRKTEAQLEKTNQAMREYTSTITALRKSQEEASMEARRSEEE
RKKLQEALERNLKEHCTTTQHQATLEAEMKTLRLQLVQEQGRVSEANQRFQVLHRSMEEK
TKTLNETISETKRLKELTESLTKERLGLEEELRAVRLEHNTLLQGKQSEDDQMSTQIAAL
QQQLQNSQHTRVEHDKLIQQLSQEREKLLLEMQNILKQASETSSLIQSSQSRCTELQQER
DSLLRKIKTLEENTSRMQKTEEERINIKMSLETELRLKKQFQEENERLRNELGIWKKQGQ
SQDDRVQQNVTARLALEGECTSLRSRMEQLQAQLKEVEERYKLQIRGLEQERRDLVNLRD
SLQEEVLKVKQKANAVNRYTQTDSLGTTIDPASLLFDGVRKKVTAQQLHDCGIIDKKTLE
HLTTGQQTVQDVAVDIKLNLKGTGAIAGLAGPTGKWTVTEAKRDKLISKDSAVKLLEAQA
ATGHILDPRANLRMTVEEACLNGLVDEEDKKQLLIAEAACVGFRDLISNKFLSACQAMRK
GIIDQDTALRLLQAQEAAGGILDPVLSVYLPKDTARDRNVIDENLYHALNAKPNCFIDPA
TKSNTSYVGLKRQCKADPNTGLLMLPAPAAPLTVQGLRRKIPVSDLVDGNLLKPSDIDQL
IEGKLTSQDIEHRLRAYLQGSTCIAGVYDEADKRVLSVYQAMKEGLLRPGTTLELLEAQA
ASGFIIDPINNKYCTVDEACKKGLIGVEFKDKLLSAERAVNGYKDPGSGKIISLFQAIEK
GLIEKGHGIRLLEAQIASGGIIDPKHSHRIDVDVAYKKGYFDEEMSQILKDEGDDTKGFF
DPNTQDNLTYLQLKSRCITDDKTGLVLLPLYDKNKISTQKNTTRKTRVVIVDPDTNKEMT
VHEAYQKRMIDYETYVELSKQESEWEEITVTSSDGTSKLVISDRKTGLQYDLKELLDKGV
IGEDDLQEYRSGNITLVQFVDIITSKTIAMNKPLSSSSSLGSSQIVKSEVMTSIESQSPT
SPNTLKRIASMSITLTSPGHEVMDEQSPVGAIFDTEKSEKLSLYEAMKRGLVDFITAQRL
LEAQACTGGIVDPENGRRISIQEARRKGIIDEDMANRLKPAQKAYSGFEDVKTGKKLSAA
EAVKEKWLPFEAGQRFLEFQFLTGGLFDPEHGRRRTVDEALHLGWLDRRVSQKLLDTRHH
PKMISCPKTKLRITYKEAMDACMVEDKTGIRMLPATSASSHGISPYSNPSSAPVSHSGPR
RGSIDQTYSNSSTTRYTSYSYSSTSFSSRSLS
NT seq
8019 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttacaggtcgcagcgctcattcagccggcgctcgcgctctcggtcgagctcg
cgcagtgacgtcgcggtcagtaactatcatctgagcgggaacgggttcggaccggagtct
gtcgaggacatgaactacaacttctccaagagctccatggggggaggacagggacctccc
cagcaccttatcatctatcaaagagcttctattctccaaggccaatgccaagagttcctc
agtaaagcagagtttatattacagacggaaacagatagagctcgggctacagcagaagcg
gagcattgcgtaatgtctgctggtgacattattgaacatctcaaaggttttgctctggag
cttagggaattgggccagcccaacgagagtgtgctaatgactgttgaagagtgcacagag
cacctaagagcagtacacatggctctgggcggctctctgcaaagaaatagccgaagcagc
agaagcagcatgggctgggatgagatggacagaaaccttcaagatgccctcgcatggatc
gcccagcagaagggtgtgatagagacatcgccatggggagacgagcccagcgtaatcgag
cagcacatcatgaatcacaacaaatttcacagctcaatccagagaagtgtggaaatggat
cgagctcgaggggaactaagagagagaagagacaaggccagcctgcatttgctggagcag
gaatgggacagcttacagaaaatgtcagttgaacgtggagctcacttacacgagcttcag
aagatcatcgatgagatcactagggagatcatgtgggtaaacgagaaagaagaggaggaa
ctgatgtttgactggggcaacagaaacattgacgtctacatccctaagaagcaggagagc
tattccatgttgatgagtgatttggaggagaaagagaaacatttaaataaactgaaactg
aaagtggacaacctgctggcaagcaatcaccctgcattagacaaaattgaggcgtacatg
gagactcttcagacccagtggagctggcttcttcagatcaccaaatgcattcatgtacat
ctaaaggagaatgctgcttacaatcagtttttcatagaagcaaatgaaacaaatcgcaga
ctacaacagcagcatgagatgatccgcaagaaattcgcctgtgacaaaatgactcctctg
cccaatttacaggaactgcttaaagttttagagaaagagcaggattatctgttggagcac
aaacaacaggtccagcaattggtcaataaatccaagaacatcgtgagactaagaccaaga
aacccagaagaaaagagtaccagtccagttaaagtccaggcattgtgtgacttcagacaa
gatcagaaagtgatctgtaagggcgatatggccattctgaaggataactcggagcgaagt
aagtggcttgtaactgggcccggagggctggatatggaggtgccttccatctgcctgata
gttcctccacccaacccgctgtctattagcctcgcaagcaagaatgagcagtattacgag
gcccttcagtcagtctggaaccagctcttcatcaacataaagagcctcatctcctggcag
tactgcctgcacgacatcagccgcatcaactccctcacaatcaccatactgactcaaatg
cggccagagcagtaccgcagcatcatgaaaagcttggagtttcactatcaggagtaccag
aggaattgttcagggtccgagatgtttgaagaggatgataagaaagccattgagagccag
tataatggagcccagcaacactacgataacctggtcgaacagcttccagcctacaataag
gaggtagtaactggtgtcagcgtgctgagtgagttgcatgccctgcagctgaagctgcat
gctctggagtctgcactcggtacacaccagcacatcccaatgggacagggagcaccagca
caatacaccagtcttatcactggcacacaggcaacaatgagggatgtagagtcactgagg
ggagagtttcagaggctaaaaggaccggtgctaacagaattagaggctacgagagacacg
gataaagcacagtttcttcaaagtcaactcaaccttattaaccagagacttgacaagctg
cggtctcactcttccacttatttacaaaggttaaaggcactaaagtctttgcatcaggtg
ctactacaggcagaggacgtagtgaaggttaatgaaactcgactcacggagagagagacc
acatcactggagccagctgaagtccaggagtaccagaacactcttagggtcatgcggtct
gagctcgatcagaaggagggtgtgttgcattcactagaggatgaaatgatcaaggctcgt
cagtgcaatgagcagattgatcagaactgtcacaggtgtgatgttgacctgtgtctgtac
agtgagcatgtaaagcagctctctgatcgctggaagcgaattcagacacagattaacagc
aggtattcagatctggagacatacctgcagcagctaaagtattacctgaactcgagctca
gctctcaccacctggattaatgacaccaaaaggcgtacagaacctcagctgagcgctaag
acagatgacatcaccctcgtcaacaaactccttacccaacaaaaggcactgaattctgag
ataacagcaaagagagagaccatggatgctgtccagagagacggtgacacctgcgttaat
accatcaaggactatgagcttggattggcatcttacagtgccgggctagaaactctactc
aacattcctataaaaaaatccatgctgcagtctccagctacagttgtgatagaggaggtt
tcttctttgcatagccgctattcagagctgcttactcgttcgagtgattattgcaaattt
cttggagactcattaaagaacttggaagagctcaagatacggaacaccaagatagatatg
cttgaggaggagctacgccttctgagagcagacatagaagaccgcaatgctaagaatgtg
tcgctgcaagaggcactctcgcgctaccagctaaagctgaacgaatctcaggagcacctc
ctttccctggaggaggtgaagagaaaccaggctctaaagtgcaccacagtacaggcgaat
cttagctcctcgcagaaccgcctacaagagctcacggatgaggtacggcgtctcaaaatg
cttgtggaggaggagaaacgaaaccggaagatcgtggaggaacggtatagcagtcagcag
gatgatcacgagggggccatgcggaaaagactgaaggagttagagggggccaattgggcc
aaaatcgaactcgagcaagccgtgtcggaacggacgcgggagctcgagcatgtgcggagg
cagttggaggaggagacgaagaacctgaaacagacacagatggagctggctaaggtaaga
cagcagcacagtacagagatgagggaggtcaaacagacctacgagtcgcaaatcctggta
acacaaacaaacatacagatgctctcaaagcagcggaaggatgactccgtgtccatgcag
atggagtgcagcagggtagagggggaatgcaagaagttgcaggaggagttaaggaaggtg
cagcatgccttcagtgaagaacaagcgcaaagaagacatgcagaggtaatgctgcagcaa
caagtccaagcaggcacagaggaagccagaaaaaggagtgaattggaggctcagattcaa
cagattcttagtcagcagagtgcagaagagagtagatggaaaggagtgcaagcgcagtcc
acaaagtctctgcaggaaaaaaacactcagatctccaacctccgacagtcacttgatgac
gacatgcacaagcggagagcactggaggcagagaacggccatctgcaaaaggagctagca
gacctacatgctaaacatacaacttctagtcaggaactaatcaaactccgatcttcacac
caagagctaagcatccttcgtgtggagttggaaagccagggcaatgagcgaaaccgggca
gaactgaagatggcacaccttcaggtgagggtccaagagctccaggaggagctgaaagaa
ctggacgggcagatgaatcagcaaataaaagtagcccaagatgaggcagccaagcgcagg
aagacggaagctcagcttgagaagacaaaccaggctatgcgagagtacacctccaccatc
accgctttacgaaagagtcaggaagaagctagcatggaagccagaagatcggaagaagaa
cgcaaaaagctccaggaggctcttgagcgtaacctaaaagagcactgtaccaccactcag
catcaagctacactggaagctgaaatgaaaactttaagacttcagctggtgcaggagcaa
ggtcgggtctctgaggccaatcagcgctttcaagtcttgcaccggagcatggaagagaaa
accaaaactcttaacgagaccatttctgagaccaagcgcttaaaggagctcaccgagtca
ctcaccaaagagcgcctcggcctggaggaggagctacgagctgtgcgtctggagcacaac
acactgctgcaaggcaagcaaagcgaggatgaccagatgagcacccagattgcagcgctt
cagcaacagcttcaaaacagccagcatacccgtgtagagcacgacaaacttatccaacag
ctctcgcaggagagagagaagcttctgttggagatgcagaatatcctaaaacaagccagt
gagacatcaagcttgatccagtcttcccagtctcggtgcacggaattacaacaagaacga
gattccctcctcaggaagattaaaactctagaagaaaatacatcccgtatgcagaaaact
gaggaagaacgtataaacatcaaaatgtcactcgagacagaactgcgacttaaaaaacag
tttcaggaagagaacgagaggctcaggaatgagctcggcatctggaaaaaacaaggtcag
agccaagatgatcgtgtgcagcagaacgtcacagcgcgtttggcgctagaaggggaatgt
acttcgctgagaagtcgtatggagcagcttcaggcccaactgaaagaagtcgaagagcgg
tacaagctccagatcaggggattggagcaggagcgaagagacttggttaatctcagagat
tctttgcaggaagaggttctaaaagtaaagcagaaagcgaacgcagtaaacaggtacacg
cagacggattctcttggcacgactatcgatccagcttctctgttgttcgatggtgtccgc
aaaaaagtcacagcccaacagttacatgactgtggtattattgacaaaaaaacactagag
cacttgacaacaggccagcagactgtccaggatgtagctgttgatatcaaactaaatctc
aagggcacaggagccattgcaggtctagcgggacccactggaaagtggacagtcacagag
gccaagagagataagctgatctcaaaggacagtgcagtgaaactactagaggctcaagca
gcaacgggacatatacttgatcccagagcaaatttaaggatgaccgtggaagaggcgtgt
ttgaatggacttgtagatgaagaggataaaaaacagctgttgattgcggaggccgcctgc
gttgggtttcgagatttaatttcaaataaatttctgtcagcctgtcaagctatgagaaaa
ggaattatcgatcaagatacagctctgcgtctgctgcaggcccaggaggctgcgggaggg
attcttgatcctgtgcttagtgtgtacctccccaaggatactgccagggatcgtaatgtg
attgatgaaaatctttatcatgccctgaacgcgaaaccaaactgctttatagaccctgcg
acaaagtcgaatactagctatgttggcctgaagaggcagtgcaaagccgacccaaacaca
ggcttgctcatgctaccagccccggcagcaccattgactgtacaaggtttacgaagaaag
atccctgtgtcagatctggtagacggcaacctgttaaagccttcagacattgatcagcta
atagaaggcaaactgactagccaagacattgagcacaggcttcgagcctatctgcaggga
tctacctgcatcgctggagtctacgatgaagccgacaagcgcgttctatctgtctaccaa
gcaatgaaagaaggtcttcttcggccaggcaccacactggagcttctggaggctcaggca
gcgtcaggcttcataattgaccctatcaacaacaagtactgcacagtggacgaagcttgt
aagaaaggtctgatcggtgtggagtttaaagataagcttctttcagctgaaagagccgtc
aatggatataaagatcctggtagtggaaagattatctcccttttccaggctattgagaaa
ggactgattgaaaaaggccatggtattcgcctactggaggctcagatagccagtggtggc
attattgatcccaaacacagtcacagaattgatgtggatgttgcttataagaaaggatac
ttcgatgaagagatgagtcagattctaaaagacgaaggcgatgatacaaagggatttttc
gatcctaacactcaggataatctcacctatctgcagttaaagagtcgttgcattacagat
gataaaactggcctcgtgcttctgccactttatgataaaaacaagatatcaacacagaag
aacactacaaggaagacacgagttgtcattgtagatccggacaccaataaggagatgacg
gtacatgaagcgtatcagaagcggatgattgactatgaaacttacgtggagctttccaag
caggagagtgagtgggaggagataactgtcacttcctcagatggtaccagtaaactggtc
attagtgataggaagacgggtcttcagtacgatttgaaagaactgcttgataagggtgta
atcggcgaggacgacttgcaggagtatcgctctggaaatattactcttgtacagtttgtt
gacatcatcaccagtaaaaccatagcaatgaacaagcctctcagctcatcctcatccttg
gggtcatcccagatagtcaaaagtgaagtcatgacatcaattgaaagtcaatctcccacc
tcaccaaacactttgaagcgcattgccagcatgtcaattactctgacctcacccggtcac
gaggttatggatgaacagagtccggttggagccatctttgacaccgaaaagtctgaaaag
ctcagtttatatgaagcaatgaagcgtggccttgtagatttcatcacagcacaaagactg
ctagaggcacaagcctgcactggtgggattgtagacccagaaaatggtcgccgcatctcc
attcaagaagctcgtcgcaagggcataattgacgaggacatggcgaatcgactcaaacct
gcacagaaggcttacagtggctttgaagatgtaaagaccggtaagaagttgtcagcagct
gaggcagtgaaagaaaaatggctgccgtttgaggctggacagcgtttcctcgagttccaa
tttttaacagggggccttttcgatccagagcatggccgtagacggacagtggacgaagct
ttacacttgggatggttggatagaagagtgtctcagaagctcctggacactcgtcatcac
cccaagatgataagctgcccgaagacgaagttgaggatcacgtacaaggaggctatggat
gcctgtatggtggaagataaaacgggaatacgcatgcttccagcaacctctgcctcatca
catggaatcagcccttattcaaacccaagctctgctccagtctctcactctggacctcgg
agaggcagcatcgaccaaacttattccaactcgtccaccactagatacaccagttatagc
tacagtagcacctccttcagcagcaggtctttatcgtag
DBGET
integrated database retrieval system
