Clarias gariepinus (North African catfish): 128543313
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Entry
128543313 CDS
T10780
Symbol
socs7
Name
(RefSeq) suppressor of cytokine signaling 7 isoform X1
KO
K04699
suppressor of cytokine signaling 6/7
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128543313 (socs7)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
128543313 (socs7)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOCS_box
SH2
Motif
Other DBs
NCBI-GeneID:
128543313
NCBI-ProteinID:
XP_053369671
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Position
15:complement(8291977..8302544)
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AA seq
799 aa
AA seq
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MSTGQDMSPDFVLMRLVSAAEEDRLDAENGNLSAGTGGAVPGYAQDVLSHGNVKGKLDCA
QNQLSAGNKAPQCAGSEAPDAGVMASRDALALPPPPLHSAQARAYDLSHRRGIGPQLLVF
RNVSRDPDGLSENNADASMAFEEQTSESSGSANNNNAPSAGDAQQHQYHPPWALHPELKL
STAHTDRAELCHRHRIISEKRDWPQLVDKSNPTAVLDPAWSVRAQEELRLPDRPALELAR
QFGELGLAPVPEFLLKDGDLQHCSCSTTPGIRQGEDPSETSDALLVLEGLGSEEVNNSES
QNGAQVKTQLALKCFPSVLSGQAVGVTGGLCLPACRDSQLCCLLQGSLSIKAQSNTNDRD
CTQFPSSSSSVEPVRSASASSSLGSNPSMQSAGPSRVPYSEKALKVPAKSRKGSLKIRLS
KLFRTKSCSGSNNLLDKRPSVTFSISSAGSLVDMSGVSTVEHDTASQPGLTRAQSAFSGA
AFTPVFTGETVSLVDVDISQRGRNSPHPPTPPPPPRRSLSLLDDIGGPQPGPFLVNVMGA
SLQSLPLPLPPPPPLHATIQHSLSLNDAFFRALPHSSPSPIETPPPMRVAPSSNVCPLRG
VDSSSFTASLRELERCGWYWGPMNWEDAELKLKGKPDGSFLVRDSSDPRYILSLSFRSQG
VTHHTRMEHYRGTFSLWCHPKFEDRCHSVVEFIERAIMHSKNGKFLYFLRSRVPGLPPTP
VQLLYPVSRFCNVKSLQHLCRFCIRQLVRIDHIQELPLPKPLISYLKKFYYYDPEEEMYL
SIKGMRQMAGVEQEPESET
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgggcaggatatgtctcccgattttgtcttgatgcgcctggtgtctgcggcc
gaggaggaccgcctggacgctgagaacggcaatctctctgcgggcaccggaggagcggtg
cctggatacgcgcaggacgtcttgagtcacggaaacgttaagggtaaactggactgcgcg
cagaatcagctctcagcgggaaacaaagctccgcagtgtgccggaagcgaggcacctgac
gcgggtgtgatggcgagcagagacgcgctggctcttcctcctcctccgctacactccgct
caggcccgcgcttacgatctcagccacagacgcggcatcgggcctcagctcttagtgttc
cgaaacgtttcaagagaccccgatggattgtccgaaaacaatgcggatgcttcgatggct
ttcgaggagcagacttccgagtcgagtggcagcgcaaataacaacaatgcaccgagcgct
ggtgatgctcagcagcatcaataccatcctccatgggcgctgcatcctgagctgaagctg
agcacagcgcacacggacagagccgagctgtgccaccggcatcgcatcatctcggagaaa
cgcgactggccgcagcttgttgacaaatcaaacccgactgcggtgttagacccggcatgg
agcgtgagagcgcaggaagagcttcggctcccggacaggcctgctctggagctcgcgagg
cagttcggggagctgggactcgccccggtgcccgagtttttgctcaaggacggcgatctg
cagcactgctcgtgctccacgacgcccggaatccgacaaggcgaagatccatccgagacc
agcgatgctctgctcgtgctcgagggcctcggctcggaggaggtcaacaattccgagtcc
caaaacggtgcccaggtgaaaacacaactcgcgctcaaatgtttcccatcggtcctctcg
ggccaggcggtcggggtcaccggtggtctctgcttaccagcatgtcgcgactcacagctt
tgttgtttgttgcaaggctccctatccattaaggctcaatccaacacgaatgacagagac
tgcacacaattcccatcctcatcatcatcagtagagcccgtgcgttctgccagcgcgagc
tcgagcctcggttcgaacccgagcatgcaaagcgccggtccgtcccgggtgccgtattcc
gagaaagcgctgaaagtgccagcgaagtccagaaaagggtctctcaaaatacgtctgagc
aaacttttcagaactaaaagctgtagcggctctaataatctcctggataagagaccgtcg
gtgacgttttccatctcttcagccggaagtctggtggacatgtcaggcgtgagcaccgtg
gagcacgacactgccagccaacctggattaacaagggcccaaagtgccttctctggtgct
gctttcactcctgttttcacaggggaaacagtgtcgctggtggatgtggacatctcacag
cgaggacgaaactctcctcatcccccaacccctcctccacctccacgcagaagtctcagc
ctgctagatgatataggcgggccacagccagggcctttcctagtgaatgtcatgggggca
tccctgcagtctctccccctgcctcttcctcctcctccccccctccatgccaccatccag
catagcctcagcctcaatgatgctttcttccgagctctccctcattcttcgccatcacca
attgagactccacctccaatgagagtagctccatcttcaaatgtttgtcctctaagggga
gttgattccagcagcttcacagcgagtctgagagaattggagaggtgtggctggtactgg
ggcccgatgaactgggaagacgcggaactgaaactgaaagggaagccggatggttctttt
ctggtgcgagacagttcagacccccgatacatccttagtctcagtttccgctcacaagga
gttacacaccacacacgcatggagcattacagaggaaccttcagcttatggtgccatccg
aagtttgaggaccgctgccattctgtggtggagttcatcgaacgtgccatcatgcattct
aagaacggaaaattcctttactttctgcggtcacgtgtacctggactcccaccgacccca
gtgcaacttctgtatccagtatcccgcttctgtaacgtcaaatccctgcagcacctttgc
cgcttctgcatccgacagcttgtccgcatagaccacattcaggagctccctctcccaaaa
cccctcatttcctacctgaaaaagttctactattatgacccagaggaagagatgtacctg
tcaatcaaaggcatgcgacagatggcaggtgtagagcaagagccagagtctgagacataa
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