Clarias gariepinus (North African catfish): 128544290
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Entry
128544290 CDS
T10780
Name
(RefSeq) immunoglobulin mu heavy chain
KO
K06856
immunoglobulin heavy chain
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04020
Calcium signaling pathway
cgar04145
Phagosome
cgar04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128544290
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128544290
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
128544290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128544290
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Phagocytosis
Opsonins
128544290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
C2-set_2
ig
Ig_3
V-set
Ig_2
BiPBP_C
Lact_bio_phlase
Motif
Other DBs
NCBI-GeneID:
128544290
NCBI-ProteinID:
XP_053370287
LinkDB
All DBs
Position
16:27251612..27297100
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AA seq
922 aa
AA seq
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MFIQYCCSQTLIESDPVIIKPGQSHKLTCTASGFDFGSYWMAWIRQASGKGLKWVASISY
NSGSKYYSSSVNGRFTVSRDNSKMQVYLHMNSMRAEDTAVYYCARVYCDTYFDHWGKGTS
VAVTKATQEAPRSLFPVWQCGASPDGFVTLGCLTRNLATADGLSYVWKDASGTALTTVVQ
YPAVLDNGQYSSVSQARVPATDWNASKKFTCEVSNSLGTKTAELKIRRRSVIAYPPIISI
STSINTATNDINLICWLDGFSPKAIIVDWGVGNKGTEKKFQKEGKKEFSMLSQISINPQQ
WNEGKEFTCSAKHQAKIYSQSWSICKENVQKTPTVVIRRSLADIGRRDGAVLECAASSLP
SGELSVIFQANDVNFPEIQSVNLPEAQDTLVVSFTIPETHRTKYHHDPLVELSVVSSEDK
TASTVQKLLCYGTGLNPVIKWLPESVGNNKSEVTMNEDGFVKVSSELSVSEQEWKRGTTF
TCQVNDQGGLKTVQKNTSFCAVTQDHARNAQVYLLGPSISDMPEEDPVSVTCLLLGHRLQ
DFSVNCKLMYDLCSFSANMSVIRPAHLARQSTPKLLCPFLLHTDVFVCFADLAATLLLTT
PTQTELDSGTATFICLASEFYPKSHTFKWTHDMINIENKVKRTILSKEKDTYTAISILEL
TANEWIDSSSPVKCEFQHKAQNLSKGARHVSVDPQQPKVTIIPPSNTDILIKRSGDLVCK
AKGPEGFTGLKWLVNGKEVASLSEKDVSGKTAITLTTLISYEQWNSGTKFTCEVYHTTFA
QGFIKEDYQRENGNRKCPEVYLLAPSQSSLSNSVTLTCYVKDFYPQEMAVSWLVDDKQVG
DVVKQNTTKVIKRDNYFSAYSQLIVNTADWTNGSVFTCNVYHESIADPVRHISRSIAYNS
NPPTLVNLSLNVPQNCQPSSLH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgttcattcaatattgttgcagtcagacactgattgagtctgatcccgtgatcatcaaa
cctggtcagtctcataaactgacctgcacagcatctggatttgactttggtagctactgg
atggcttggatcagacaggcatctggaaaagggttgaaatgggttgcaagcatctcctac
aacagtggtagcaagtattactccagttcagttaatggtcgcttcaccgtctccagagac
aacagtaagatgcaggtgtatctgcacatgaacagcatgagggcagaagacactgcagtg
tattactgtgctagagtttactgtgacacctactttgaccactggggaaaaggaacttcg
gtggccgtgacaaaagcaacgcaagaagccccgaggtctctgtttcccgtgtggcagtgc
ggcgcgtcccctgatgggttcgtcactctgggctgcctcacccgcaacttggcaaccgcc
gatggactgagctacgtttggaaggatgcgagcggcaccgcgctgactaccgttgtacaa
tacccggcagtgctggacaacggacaatactcctcagtgagtcaggcgcgcgtccctgct
accgactggaacgcgagcaagaagttcacttgcgaagtctctaactccctgggaaccaaa
acggcagagctgaaaataagacgtaggtctgtgattgcgtatccacccatcatcagcatc
agcaccagcatcaacacagcaacaaacgatattaatctaatttgttggttggatggtttt
agtcctaaagcgattattgttgattggggagtgggtaataaagggactgagaaaaaattt
caaaaagagggaaaaaaagagttttccatgctgagccaaatcagtataaatccacagcaa
tggaatgaaggcaaagagttcacctgcagcgctaaacaccaggccaaaatctacagtcaa
tcatggagcatttgtaaagaaaacgtgcagaaaactcctacagtggtgatcagaaggagt
cttgcagacataggaaggagagacggtgcagtgctggagtgtgctgcaagcagtctgccc
tctggtgaactctctgtcatctttcaggccaatgatgtgaactttccagaaattcagtct
gtgaatctgccagaggcccaggacacactagttgtatctttcactattcctgaaacacac
cgaaccaaataccaccatgatcctttagtggaactttctgttgtgtccagtgaggataaa
actgcttcaaccgtgcaaaaacttctttgctatggaactggacttaacccagtgatcaag
tggctccccgaatctgtggggaataataaaagtgaagtaacaatgaatgaagatggattt
gtgaaggtgtccagcgagctatcagtttcagaacaagagtggaaacgtggaactacattc
acctgccaagtcaatgatcagggtggtctcaaaactgtccaaaagaacaccagtttttgt
gcagtcactcaagatcatgctaggaatgcacaggtttacctgttgggtccctccatcagt
gatatgccagaggaggatcctgtctctgtcacatgtctgctgttgggccacaggctccag
gacttctcagttaattgcaaacttatgtatgatctgtgctctttctctgccaacatgtct
gtgataaggccagcccatctggcaagacaatctactcctaaactgctgtgcccattcctt
ctgcatacagatgtctttgtttgttttgcagaccttgctgcaactctgctcctaacaact
ccaacccaaacagaattagacagtggaacagctaccttcatctgcttagcttcagaattt
tatcctaaatcacacacatttaagtggacccatgatatgataaatatcgaaaataaggtc
aaacgcactatattaagcaaagagaaagatacttacactgccattagcattttggaactc
actgccaatgaatggatcgactcatcttctccagttaagtgcgagttccagcacaaggca
cagaatctgtccaaaggggcaagacatgtgtcggttgacccgcagcagccaaaggtgaca
ataatcccaccttccaacacagacattcttatcaaaagatctggcgaccttgtgtgcaag
gctaaaggaccagagggcttcactggcctaaaatggcttgttaacgggaaagaggttgct
tctctatctgaaaaagacgtgtctgggaagacagcgatcactctcactacattgatctct
tacgaacagtggaatagtggcaccaaattcacctgtgaggtgtatcatacaacatttgct
caggggtttattaaagaagactaccaaagagaaaatggcaacagaaaatgccctgaggtt
tacttgctcgctccatcacaaagctcattgagcaattcggtgaccctgacttgctatgta
aaagatttctaccctcaggagatggctgtgtcttggcttgttgatgataaacaagttggc
gatgtcgttaagcagaacacaactaaagttattaagagagacaactacttttcagcatac
agccagctcattgtcaatactgctgattggaccaatggcagtgtgttcacctgcaatgtt
tatcatgagtcaatcgcggaccctgtgcgccacatatccagatccatcgcttacaattca
aatccacccaccttagtgaatcttagtctgaatgttccccaaaactgccaaccttctagt
ctgcactaa
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