Clarias gariepinus (North African catfish): 128544744
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Entry
128544744 CDS
T10780
Symbol
pdgfbb
Name
(RefSeq) uncharacterized protein pdgfbb isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
cgar04020
Calcium signaling pathway
cgar04510
Focal adhesion
cgar04540
Gap junction
cgar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128544744 (pdgfbb)
04020 Calcium signaling pathway
128544744 (pdgfbb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128544744 (pdgfbb)
04540 Gap junction
128544744 (pdgfbb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128544744 (pdgfbb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgar04052
]
128544744 (pdgfbb)
00536 Glycosaminoglycan binding proteins [BR:
cgar00536
]
128544744 (pdgfbb)
Cytokines and neuropeptides [BR:
cgar04052
]
Cytokines
Growth factors (RTK binding)
128544744 (pdgfbb)
Glycosaminoglycan binding proteins [BR:
cgar00536
]
Heparan sulfate / Heparin
Growth factors/receptors
128544744 (pdgfbb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
128544744
NCBI-ProteinID:
XP_053370971
LinkDB
All DBs
Position
16:complement(12719279..12733333)
Genome browser
AA seq
531 aa
AA seq
DB search
MSTGLCWLRALLLAACLCFGGAERDPLPVALAELVKSGSVSSTEDLQLLLLSESVADDDP
ESDHANNTNNRLPRSLLDAQPAQQAQCKVRTEVMEVTRSMLDRSNANFLLWPPCVEVQRC
SGCCNTKNLKCVAVLTHTRYLQVMKIQYVNMRPVYNKAIVSVNDHVECRCQPAPRPASRR
KSSAHKQEGRDRSGKPRYKDELHRGDEFKPNQRLKLEDLLSHSWLPLEKGLDAWRHNRTH
QGRTRDYSLEDWKRYNSSSNGTNGWSSERLTYPLADHFKGEDTGVLLHNVTRQKGRGREK
EAKDLEIQKNCTINDDRLTNQSLVNRVSRTEITNQIPQHESEPLHAGHSKHAKSSKVHGN
ETIQNQMRSEAHVGQTNQTIIPKPTEEANQKQDHLSNADKESNKNNQGNETPEMARPQEE
TRTRSTLLKERKALEEEKEELLLLHKLLDEEKHKHILKAQHNSQHEDQKQHQLHHKHQQT
QTTTQPTERKTTTPVRMSTPHTPPRQPPRPPKRLRKHRNRISKAVMRAMLM
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgggctctgctggctgcgcgcgctgctgctcgcggcgtgtctgtgcttcggc
ggcgcagagagggatcctctccccgtagctctggctgagttagtgaagagcggctctgtc
tcctccacagaagatctgcagctgctgctgctctctgaatccgtagcagatgacgatcca
gagagtgaccatgccaacaataccaacaatcgactgccaaggagccttctggatgctcag
ccagctcagcaagcacaatgcaaagtgaggacagaggtcatggaagtcacacgctctatg
ctggaccgtagcaatgctaactttctgctatggcctccgtgtgtggaggtgcaaagatgc
tctggatgctgcaacacaaaaaaccttaaatgtgttgctgtactcactcacacgcgctac
ctacaggtgatgaagatccagtatgtgaacatgcgcccagtatataataaagccatagtg
tcagttaatgatcatgtggagtgccgctgtcagcctgctcctcgtccagcctcccgcaga
aagtcttctgcccacaaacaagaaggaagagatcgttcaggtaaacctcgttacaaagac
gagcttcaccggggcgatgaatttaaacccaaccagaggcttaaactagaggatttgcta
agccacagttggctgcccctagaaaagggactggatgcctggagacacaataggacacac
caaggaaggaccagagattattctcttgaagattggaaaaggtataacagcagctccaat
ggcacaaatggctggtcatctgagagactgacttatcctctggccgatcactttaaggga
gaagatacaggtgtactactccataatgtgacaaggcagaaagggagagggagggagaaa
gaggcaaaagatttagaaatacagaaaaactgtacaataaatgatgataggttgactaat
cagtcattagtgaatagggtcagccgcactgagataaccaatcagattccacagcatgag
tcagagccactacatgcaggccacagcaagcatgcaaagagtagtaaagtgcacggaaat
gagactatccaaaatcagatgcgtagtgaagcacatgttgggcagaccaatcaaactatc
attcctaaacctacagaggaagccaatcaaaagcaagaccatctctctaatgcagataaa
gaatctaataaaaataatcaaggaaatgagactccagagatggcgagacctcaagaagag
actagaaccaggtccactttactaaaggaaaggaaggcattagaggaggagaaagaggag
ctgctgttacttcacaagcttcttgatgaagaaaagcacaaacatatcctgaaagcacaa
cacaacagtcagcatgaggaccaaaaacagcaccagctgcaccacaaacaccagcaaacc
caaacaactacacaaccaacagaaagaaaaacaactaccccagtcagaatgtccactcca
cacacacctcctcgacagcctcctcgtccaccaaagagattaaggaaacaccgcaaccgt
ataagcaaggccgtcatgagggccatgctcatgtag
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