Cyanobium gracile: Cyagr_1562
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Entry
Cyagr_1562 CDS
T02359
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cgc
Cyanobium gracile
Pathway
cgc01501
beta-Lactam resistance
cgc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cgc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Cyagr_1562
01503 Cationic antimicrobial peptide (CAMP) resistance
Cyagr_1562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgc03036
]
Cyagr_1562
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgc02000
]
Cyagr_1562
01504 Antimicrobial resistance genes [BR:
cgc01504
]
Cyagr_1562
Chromosome and associated proteins [BR:
cgc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Cyagr_1562
Transporters [BR:
cgc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Cyagr_1562
Antimicrobial resistance genes [BR:
cgc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Cyagr_1562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
AFY28721
UniProt:
K9P7L5
LinkDB
All DBs
Position
complement(1552226..1553374)
Genome browser
AA seq
382 aa
AA seq
DB search
MIGHPSRPPLPGALTWRLRRSGTNFPAAAAALLGATLLGACQAEAPPGRPPLSVRAEPAT
LAPFTDNVDTVSTLEAIEEVRLAAQAGGRIERLVVGQGDKVAAGQILLVLDQAQARADVA
RLEAEVQTNKLNYERYEYLVRQGAASAFQRDEFRQRYLSSRQDLVARRADLAFRDLKAPI
AGTIGDVQVKLGDVIAAGDPFTTIIRNDRLMARVDVPAVFSSRLRVGQTVILMDPATNKP
MAQGVVGSLDPGVVAGTQSLLAKAEFANPGGVLRTGLRTRTRLVLDSRQELSVPFAAVTQ
ISGQSFVYEVGSLADLERRPGRADLAVARKLPAGTSFALQTPVQLGPLQNNRYPVLKGLQ
PGTRVITTNLINLRNGAPVKVN
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
gtgatcggccatccgagcaggccgcctctacccggggcactaacgtggcgcctgcgacgc
tccggcaccaacttcccggcggctgccgccgcccttcttggcgccaccctgctgggggcc
tgccaggcggaagcccctccgggccggccgccgctctcggtgcgcgccgagccggccacc
ctggctcccttcaccgacaacgtcgacaccgtcagcacccttgaggccatcgaggaggtg
cgcctggcggcccaggccggcgggcggatcgagcggctggtggtgggccagggcgacaag
gtggccgccggccagatcctgctggtgctcgaccaggcccaggcccgtgccgatgtggcc
cgcctggaggcggaagtccagaccaacaagctcaactacgagcgctacgagtacctggtg
cggcagggcgccgccagcgccttccagcgagatgagttccgccagcggtacctctcttca
cggcaggacctggtggcgcggcgggccgacctggcgttccgcgacctcaaggctcccatc
gccggcaccatcggcgatgtgcaggtgaagctgggggatgtgatcgccgccggcgatccc
ttcaccacgatcatccgcaacgaccggctcatggcccgggtggatgtgccggcggtgttc
tccagtcgcctgcgggtgggacagacggtgatcctcatggatccggccaccaacaagccg
atggcccagggggtggtgggttcccttgacccgggcgtggtggccggcacccagtccctg
ctggccaaggccgagttcgccaatcccggcggggtgctgcgcaccggattgcgcacccgc
acccggctggtgctcgacagccgccaggagctgtcggttcccttcgcggccgtcacccag
atctccggccagagcttcgtctacgaggtgggcagcctggccgatctggagcggcgcccc
ggccgcgccgacctggcggtggcccgcaagctccccgccggcaccagcttcgccctgcag
actcccgtgcagctgggccccctgcagaacaaccgctatccggtgctcaagggcctgcag
cccggcacccgcgtcatcaccaccaacctgatcaacctccgcaacggcgcgcccgtcaag
gtgaactga
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