Cricetulus griseus (Chinese hamster): 100689399
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Entry
100689399 CDS
T02813
Symbol
Ldlr
Name
(RefSeq) low-density lipoprotein receptor precursor
KO
K12473
low-density lipoprotein receptor
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03272
Virion - Hepatitis viruses
cge04144
Endocytosis
cge04913
Ovarian steroidogenesis
cge04925
Aldosterone synthesis and secretion
cge04927
Cortisol synthesis and secretion
cge04934
Cushing syndrome
cge04976
Bile secretion
cge04979
Cholesterol metabolism
cge05145
Toxoplasmosis
cge05160
Hepatitis C
cge05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100689399 (Ldlr)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100689399 (Ldlr)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
100689399 (Ldlr)
04925 Aldosterone synthesis and secretion
100689399 (Ldlr)
04927 Cortisol synthesis and secretion
100689399 (Ldlr)
09154 Digestive system
04976 Bile secretion
100689399 (Ldlr)
04979 Cholesterol metabolism
100689399 (Ldlr)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
100689399 (Ldlr)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100689399 (Ldlr)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100689399 (Ldlr)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
100689399 (Ldlr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cge04131
]
100689399 (Ldlr)
Membrane trafficking [BR:
cge04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
100689399 (Ldlr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
cEGF
FXa_inhibition
EGF_CA
SGL
EGF
EGF_LRP2
EGF_3
hEGF
Vgb_lyase
Psg1
Motif
Other DBs
NCBI-GeneID:
100689399
NCBI-ProteinID:
NP_001233752
UniProt:
P35950
LinkDB
All DBs
Position
4:134606322..134630246
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AA seq
854 aa
AA seq
DB search
MSTADLRLRWAIALLLAAAGAAAEDTCDRNEFRCRDGKCIASKWVCDGSPECPDGSDESS
ETCMSVTCQSKEFSCGGRVSRCIPNSWRCDGQTDCENGSDEQGCAPKTCSQDEFRCQDGK
CISQKFVCDQDQDCVDGSDEAHCQAATCGPAHFRCNSWPCIPSLWACDGDDDCEDGSDEW
PQNCGGRDTAAAWSSSPCSSLEFHCGSSECIHRSWVCDGSADCKDKSDEEHCVTATCRPD
EFQCADGTCIHGSRQCDREYDCKDMSDELGCINVTQCDGPNKFKCHSGECIALDKVCDSM
RDCRDWSDEPIKDCRTNECLDNNGGCSHVCKDLKIGYECLCPNGFQLVDQHRCEDIDECQ
EPDTCDQLCVNLEGSYKCECRAGFHMDPHTRVCKAVGSVAYLLFTNRHEVRKMTLDRSEY
TSLIPNLKNVVALDTEVANNRIYWSDLSQGKIYSALMDQAPTLSYDTIISGDLQAPDGLA
VDWIHGNIYWTDSVPGSVSVADTKGIRRRTLFQEKGSRPRDIVVDPVHGFMYWTDWGTPA
KIKKGGLNGVDIYSLVTEDIQWPNGITLDIPSGRLYWVDSKLHSISSIDVNGGNRKTILE
DEKQLAHPFSLAIYEDKVFWTDVINEAIFSANRLTGSDVNLVAENLLSPEDIVLFHNITQ
PRGVNWCERTALPNGGCQYLCLPAPQINPHSPKFTCACPDGMLLAKDMRTCLTEVAPVLT
TQGTSTIRPEITAGAEGCPKHKEDQSASSTSRQPALSTVESVTMSHQVQGDRRNEERPQG
VGVLSITLPIALVILLVFGAILLWRNWRLRNINSINFDNPVYQKTTEDELHICRSQDGYS
YPSRQMVSLEDDVA
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgcggatctcaggctgcgctgggccatcgccctgctcctggccgctgccggg
gctgcagcagaagacacatgcgacaggaatgagttccggtgcagggacgggaaatgtatc
gccagcaagtgggtctgtgacggcagccctgaatgcccggatggctctgatgagtcctct
gagacatgcatgtctgtcacctgtcaatccaaggaattcagctgtgggggccgtgtcagc
cgctgcattcctaactcctggcgttgtgatgggcaaacagactgtgagaacggctcagat
gaacaaggctgtgcccccaagacgtgctcccaggatgagttccgctgccaggatggcaag
tgcatctcccagaagtttgtgtgtgaccaggaccaagattgcgtggatggctctgacgag
gcccactgccaggccgccacttgtgggcccgcgcatttccgttgcaactcctggccctgc
atccccagcctgtgggcctgtgacggggatgacgactgtgaggacggctccgatgagtgg
ccacagaactgtgggggccgcgacaccgccgctgcctggagtagcagcccctgttcctcc
ctggagttccactgtggcagcagtgaatgcattcatcgcagctgggtctgtgatggcagc
gctgactgcaaggacaagtcagatgaggagcactgcgtgacagccacctgccggcctgac
gaattccagtgtgcagatggcacctgcatccatggtagccgccagtgtgaccgtgaatat
gactgcaaggacatgagtgacgagcttggctgcatcaatgtgacacagtgtgacgggccc
aacaagttcaagtgccacagtggcgaatgtatcgccttggacaaagtgtgcgactccatg
cgggactgccgggactggtcagatgagcccatcaaggactgcaggaccaatgagtgcttg
gacaacaatggtggctgttcccacgtctgcaaggacctcaagattggctacgagtgcttg
tgtcccaatggcttccagctggtggaccagcacaggtgtgaagacattgacgagtgtcag
gagccggacacctgtgaccagctctgcgtgaaccttgaaggcagctacaagtgcgagtgc
cgggctggattccacatggaccctcacaccagggtctgcaaggctgtaggctccgtagcc
tatctgctcttcactaaccgccacgaggtacggaagatgaccctggaccgaagcgagtac
accagcctgatccccaacctgaagaacgtggtggccctggacactgaagtggccaacaat
agaatctactggtccgacctgtcccagggaaagatctatagtgccctgatggaccaagca
cctaccttgtcctatgacaccatcatcagtggggatctgcaggccccagatgggctggcc
gtagactggatccatggcaacatctactggacagattcagttccaggcagtgtttctgtg
gctgacaccaagggtataaggagaaggacactgttccaagagaaggggtccagacccaga
gacattgtggtggaccctgtgcatggcttcatgtactggacagattgggggacacctgcc
aagatcaagaaagggggcctgaatggtgtagatatctactcgctggtgactgaggacatc
cagtggccaaatggcatcacactagatattcccagtggccgcctctattgggttgattcc
aaactccactctatctccagcattgatgtcaatgggggcaatcggaagaccattttggaa
gatgagaagcagctggcccaccccttctccttggccatctatgaggacaaagtattttgg
acggatgtcataaatgaagccattttcagtgccaatcgcctcacaggctcagatgttaat
ttggtggctgaaaacctcttgtccccagaggacattgtcctgttccacaacatcacacag
cctagaggggtgaactggtgtgagagaacagccctccccaacggtggctgccaatacctg
tgcctgcccgccccacagatcaatcctcactccccaaaattcacctgtgcctgccctgat
ggcatgctactggccaaggatatgcgaacgtgcctcacagaagtggcacctgtactgacc
acccagggaacatccaccatcaggcctgagatcactgcaggagccgaaggctgcccgaag
cacaaggaggatcagtcggcttccagtacttccaggcagcctgcacttagcacagtggag
tcggtgacaatgtcccaccaagtccagggtgacagaaggaacgaggagcggccacagggt
gtgggggtcttgtccatcaccctccccatcgcactggtcatcctccttgtctttggggcc
atcctgttgtggaggaactggcggctgaggaacatcaacagcataaactttgacaaccca
gtgtaccagaagaccacagaagatgaactccatatttgccgaagccaggacggctactcc
tacccctcacgacagatggtcagcctggaggatgatgtggcatga
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