Cricetulus griseus (Chinese hamster): 100754603
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Entry
100754603 CDS
T02813
Symbol
Trpc5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04360
Axon guidance
cge04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100754603 (Trpc5)
09158 Development and regeneration
04360 Axon guidance
100754603 (Trpc5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cge01009
]
100754603 (Trpc5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cge04040
]
100754603 (Trpc5)
Protein phosphatases and associated proteins [BR:
cge01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100754603 (Trpc5)
Ion channels [BR:
cge04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100754603 (Trpc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
LEH
Motif
Other DBs
NCBI-GeneID:
100754603
NCBI-ProteinID:
XP_027289397
UniProt:
A0A061HV54
LinkDB
All DBs
Position
X:36234975..36359164
Genome browser
AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNKTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHPRRSFSTSSAEFSQ
RDDTNDGSGGARAKSKSVSFNLGCKKKACHGAPLIRTMPRAGDAQGKSKAESSSKRSFMG
PSFKKLGLLFSKFNGHNSEPTSEPMYTISDGIAQQHYMWQDIRYSQMERGKAEACSQSEM
NLSEVELGEIRGAAGSSEGALACSSSLHGASGICSSNSKLLESSEDVFETWGEACDLLMH
KWGDGQEGQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctttactacaaaaaggtcaattactcaccatacagagaccgcatccccctc
caaatcgtgagggctgagactgagctctctgctgaagagaaggccttccttaatgccgtg
gagaagggggattatgccaccgtgaaacaggcactgcaggaggccgagatctactacaat
gtcaacatcaactgcatggatcctttgggcaggagcgccctgctcattgccattgagaac
gagaacctagagatcatggagctactgctgaaccacagtgtgtatgtcggcgatgcatta
ctctatgccatccgcaaggaagtggtgggcgctgtggagcttcttcttagctacagaaag
cccagtggagagaagcaggttcccactctgatgatggatacccagttctctgagttcaca
ccagacatcactcccatcatgttggctgcccataccaacaattatgaaatcatcaaattg
cttgtccaaaagcgggtcactataccacggccccaccaaatccgctgcaactgtgtagaa
tgtgtgtccagttcagaggtagacagcctgcgccattcaaggtcccgactcaacatctac
aaagctctggcaagcccttccctcattgccttatcaagtgaggaccccatcctaactgcc
ttccggctgggctgggaactcaaagagctaagcaaggtggaaaatgaattcaaggctgag
tatgaggagctctcccagcaatgtaagctctttgccaaggacctgctggaccaagctcgg
agctcccgagaactggagatcatcctcaaccaccgagatgaccacagtgaagaacttgac
ccacagaagtaccatgacctggccaagctgaaagtggcaatcaaatatcaccagaaagag
tttgtcgctcagccaaactgccaacaattgcttgccaccttgtggtatgatggcttccct
ggatggcggagaaaacactgggtagtcaagctcctgacctgtatgaccattggcttcctg
tttcctatgctgtctatagcctatctgatctcacccagaagcaaccttgggctgttcatc
aagaagccctttatcaagttcatctgccatacagcttcctatctgacctttctcttcatg
ctcctcctggcttctcagcacatcgtcaggacagacctccatgtacaaggacctccccca
actgttgtggaatggatgatactaccttgggttttaggtttcatttggggggagataaag
gaaatgtgggacggtggattcactgaatacatccatgactggtggaacctaatggatttt
gcaatgaactccctctacctggctactatttccttgaagattgtggcctatgtcaagtat
aatggttctcgtccaagggaggaatgggaaatgtggcacccgactctgattgcagaggcg
ctcttcgcaatatccaacattttaagttccttgcgtctcatatccttgttcacagccaac
tcccacttagggcctctgcagatctctttgggacgcatgctgcttgatatactcaaattc
ctctttatctactgcctagtacttctggcttttgccaacggattgaaccagctttatttt
tactatgagaccagagctatcgatgaacctaacaactgcaaggggatccggtgtgaaaaa
cagaacaatgccttctccacgctctttgaaacccttcagtcactcttctggtctgtattt
ggccttttaaatctctatgtcaccaatgtgaaggccagacacgagttcaccgagttcgtg
ggagctacgatgtttgggacatacaacgtgatctccctggtagtgctgctgaacatgctc
attgccatgatgaacaactcctaccagcttatcgccgatcatgctgacattgagtggaag
tttgcgagaacgaagctctggatgagttactttgatgaaggtggaacgttgccaccacct
ttcaacattatccccagccccaaatcattcctctatcttggcaactggttcaacaaaacc
ttctgtcccaaaagagacccggatggaagacgaaggaggcacaacttgagaagcttcaca
gaacgccatgctgatagcctgatacaaaatcaacattatcaggaagttatcagaaattta
gtcaagagatatgtggctgcaatgataagaaactccaaaacaaatgaggggctaacagaa
gaaaattttaaggaattaaagcaggacatctccagctttcgctatgaagtgcttgacctc
ttgggaaacagaaaacatccaagaagaagcttttccactagcagcgctgaattctctcaa
agggatgataccaatgatggcagtggaggggctcgggccaagtctaagagtgtctctttc
aatttaggctgcaagaaaaaggcctgtcatggggcacctctcatcagaaccatgccaaga
gccggtgacgctcaaggaaagtcgaaagctgagtcatcaagcaaacggtccttcatgggt
ccctcgttcaagaaactgggtctcctattctccaaatttaacggccacaactctgaaccc
acttcagagccaatgtacacgatctccgacggcatcgcacagcagcattatatgtggcag
gacatcagatattctcagatggagagagggaaggcagaggcctgctctcaaagtgaaatg
aaccttagtgaggtagagttaggtgaaatccggggtgctgctgggagcagtgaaggcgcc
ctggcctgttccagctctcttcacggtgcatctggcatctgctcctcaaattctaaactt
ttagagtcatcagaggatgtatttgaaacttggggagaggcttgtgacttgctcatgcac
aaatggggtgacggacaggaaggacaagttacaactcggctctaa
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