Cricetulus griseus (Chinese hamster): 100756113
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Entry
100756113 CDS
T02813
Symbol
Nlrp1
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1 isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100756113 (Nlrp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cge04131
]
100756113 (Nlrp1)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cge04054
]
100756113 (Nlrp1)
Membrane trafficking [BR:
cge04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
100756113 (Nlrp1)
Pattern recognition receptors [BR:
cge04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100756113 (Nlrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
PYRIN
NOD2_WH
AAA_16
NPHP3_N
NB-ARC
LRR_6
AAA_14
AAA_22
AAA_18
AAA_30
AAA
Zeta_toxin
nSTAND3
AAA_33
AAA_5
Birna_VP5
Motif
Other DBs
NCBI-GeneID:
100756113
NCBI-ProteinID:
XP_027282668
UniProt:
A0A9J7GDG5
LinkDB
All DBs
Position
7:complement(84852589..84882280)
Genome browser
AA seq
1305 aa
AA seq
DB search
MQLPWLRTHTEGGHHRRARADMSRTTILAYYLEKLNKEELKEFQHRLLNQVALPEASSTE
VASNLVAQYGSRRAWDLALHTWKQMGKKQLCSQAQQEKGLTPSHHTSLSSSPSTSNMESS
SRFTSSSDHGYGSSCEQLSEKETFQNKPINSECRMRETIKITSPNQKRESPCHTPSWKTE
DFLQNYTQLLLLQRSCPRGHRSMVRERGHQDIKDRGHLIAIQDLFGPSLGSQKEPQLVIL
EGAAGVGKSTLARQVKRAWEEGQLYRDRFQHVFYFSCRELAQCKQQSLAELIAKYENVHK
DLIEEILSQPKKLLFILDGIDEPAWTLQNPKLCQHWSQKWPVQTLLSSLLRKSILPKASL
LLTARTTDLQKLIPSLGQPRWVEVLGFSESGRKEYFYTYFADEREAITAFSLVESNPVLL
TLCLVPWVSWLVCTCLTQQMGQWGELSLTAQSTTALCLKYLSQILPVRPLGPRLRGLCSL
AAEGICKGKSLFSLGDFRKQKLPGSVISTFMNMGVLQKLPNSTRYSFAHLCLQEFFAAMS
CVLIYEEEKDKRESFKIVEKLLKVYGRLDLFEAPTMRFLFGLLSDQAMDEMENIFICRLP
LERRWELLKRLLKEAHPKHSYSLGLLHCLYEIQHKELLTRAMHNVQGTRVHVQTDMAHPV
FQTNMKHLVVQTDAELMVVTFCIKFCFPVKRLQLDCGRQQEQVLRAPRLVLSRWTPITKA
SWQILFSILEFSGSLEELDLSGNLLSNYAVQSLCRTLRQPGCHLKTLWLVNCGLTSSHCV
DLTSVLKASSSLTELDLQLNDLGDSGVRLLCKGLRNPACNLRILLLDQGSLSDKVMAQLK
ALKAENPRLLIQSTRKPHGMASTSGLDKGKTSAGPSSLKRLRLQSEEDAPRRAQLKLSHT
PYSSSLGDKLTESLGTEDGFWGSTGPVATEVVDRERNLYRVQLPMAGSYHWPSTGLRFVV
TRAVTVEIEFCAWSQFLGKTPLEQSYMVAGPLFDIKAEQGAVAAVYLPHFVALQGIQEDT
LKFQVAHFLNDVVVLEAPAKVEPHCAVLKKPSFSPIGVVLKIISATRRLLPITSITLLYH
QPHTEELKFHLYLIPNDCTIRKAVDDEEMKFQFVRIHKPPPIGCLYVGSRYTVSGSETME
ITPKELELCYRSSSEAQLFSEIYVGHLQSGIRLEIKDKNADAVVWEALLKPGDLRPASTL
VAPATTVARPFLHFVDQHREQLVARVTSVDPILDKLHSQVLSEEQYEMVRAEATNPDKMR
KLFSYSRSWDQARKSQLYQALKAIHPHLILELWEVWGKALGEWVS
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgccttggcttaggacacacacagaaggggggcaccatagaagagcaagagca
gacatgtctcgcacaacaattttggcctactacttggaaaagctgaataaggaagaactg
aaggagttccagcatcggctgctaaaccaagtggccctgccagaggccagtagcacagag
gtggcctcaaacctggtggctcagtatgggagtcgtcgggcctgggacctggccctccac
acctggaagcagatgggcaagaagcagctctgcagccaggcccagcaagagaagggcctg
acaccgagccatcatacctcattaagcagttccccaagcacatctaacatggagtcctcc
agccggtttacttctagctcagaccacggctatggatcatcgtgtgaacagttgtccgag
aaggaaacttttcaaaacaaacctatcaactctgagtgcagaatgagagaaactataaaa
ataacaagcccaaaccagaaaagagagagcccttgccatacaccgtcctggaaaactgaa
gatttcctccaaaactatacacagctactacttttacaaagatcttgccccagaggccac
aggtccatggtgagagaaagaggacatcaggatattaaagatagaggacatctgattgcc
atccaagacttatttggcccaagcttgggtagccagaaggagcctcaattagtcatatta
gagggggctgctggggttgggaagtccacgctggccaggcaggtgaagagagcatgggag
gaaggccagctctacagggatcgcttccagcatgtcttctacttcagctgcagagagctg
gcccagtgcaagcagcagagtctggctgagctcatagcaaaatatgaaaatgtccacaag
gatctcatagaggagatcctgtctcagcccaagaagctgctcttcatcctggatggcata
gatgagccagcatggaccttgcagaatcctaaactctgtcagcactggagccaaaaatgg
ccagtgcagacactgctaagcagtttactgaggaaatccatacttcccaaggcttccttg
ctgctcacagctcgaaccacagatctacagaaactcattccttctttagggcagccacgt
tgggtggaagtcctgggcttctctgagtctggacggaaggaatatttctacacatacttt
gcagacgaaagagaagcaattacagcttttagcttggttgaatcaaatcctgtgctcttg
accctgtgtctagtaccctgggtgtcctggctggtctgcacttgcctaacacagcagatg
ggccagtggggagaactctcactgactgcacagtctaccacagcgctctgcctgaaatac
ctttcccagattctcccagttcggcccctggggccccggctcagagggctttgctcacta
gctgctgaggggatctgcaaaggaaagagtctgttcagtttaggagacttccggaaacag
aagttacctgggtctgtcatctccactttcatgaatatgggtgtccttcagaagctgcct
aattctaccaggtacagctttgcccacctatgtctccaggagttctttgcagcgatgtcc
tgtgtcttgatttatgaagaggaaaaggacaaacgtgaaagctttaaaattgtagaaaag
ctgttaaaagtgtatggaagacttgacctgtttgaggcacccaccatgcgcttcctgttt
ggccttttgagtgaccaggcaatggatgagatggagaacatcttcatctgccggttgcct
ctggagaggaggtgggagctactgaagaggctcctgaaggaagcccatcccaaacattcc
tattctcttggattgctccactgtctgtatgagattcagcacaaggagctcctgacacga
gcaatgcacaatgttcagggaacaagggttcatgtccagacagatatggcgcacccagtg
ttccagacaaacatgaagcacctggtggtccagacagacgcggagctcatggtggtcact
ttctgcattaaattctgcttcccagtgaagaggcttcagctggattgtggtagacaacaa
gaacaagtactgagggcccccaggctggttctgtccagatggaccccaatcactaaagcc
agttggcagattctcttctccatacttgagttctcaggaagcctggaggagctggaccta
agtggaaacctactgagcaactatgcagtacagagtctttgtaggaccctgagacagcct
gggtgtcacctaaagaccttgtggcttgtcaactgtggcctcacatccagccactgtgtg
gacctgacctcagtgctcaaggccagctccagcctaactgagctcgacctgcagctgaat
gacctgggcgacagtggggtgaggctgctgtgtaagggactcaggaatcctgcctgcaac
ctcagaatcctactgctggaccagggctctctgagtgacaaggtgatggcgcagctgaag
gctctgaaggcagagaatccacggctgctcatccagagcacacggaaaccacacgggatg
gcctctacttcgggtctggataaaggaaaaacgagtgctggcccatcctcactcaagcgg
ctgagactacagtcagaagaagatgctccacgaagggcacagctgaaactctcccacaca
ccctactcttcctctctgggagacaagctcacagagtctcttgggactgaagatggcttc
tggggcagcacaggacctgtggctactgaggtggttgacagagaacgaaacctgtaccga
gttcaactccccatggctggctcctatcactggcccagcactggtctccgctttgtagtg
acaagggcagtgactgtagagatagaattctgtgcctggagccaattcctaggcaagact
cccctggagcagagttacatggtggctgggcctctgtttgacatcaaggctgagcaggga
gctgtggctgctgtctacctccctcattttgtggctctccaaggaattcaggaggacacc
ttaaagttccaagtggcccactttctgaatgatgtggtggtcttggaggcgccagccaaa
gtggagccacactgcgcagttctgaaaaagcccagcttctctcctataggagtggtgcta
aaaataatctccgccacccggcgactcctacccatcacctccatcacgttgctctaccat
caacctcataccgaggaactcaaattccacctttatctgatccccaatgactgcactatt
cggaaggccgtagatgatgaagaaatgaagttccagtttgtgcgaatacacaagcctccc
cccataggctgcctttatgtgggctctcgatataccgtgtctggttcagagactatggaa
attacacccaaggaacttgagctgtgctaccggagctcctcagaagcccagctcttctca
gaaatctatgttggccacttacaatcagggatccggttggaaataaaagacaagaatgct
gatgctgtagtttgggaagccttgttgaaaccaggagacctcaggcctgcatccaccctg
gttgctccagccactacagttgccagaccctttctgcactttgtggaccaacatcgggag
cagctagtggcccgagtgacatcagtggaccctatcttagacaaactgcacagtcaggtg
ctgagtgaagagcagtatgagatggttcgtgctgaggccaccaatccagacaagatgcgg
aagctgttcagctacagtcggtcctgggaccaggccagaaaaagtcaactctaccaagcc
ctgaaggcgatccatcctcaccttatcctagaactctgggaggtgtggggcaaagccctt
ggggaatgggtatcctga
DBGET
integrated database retrieval system
