Cricetulus griseus (Chinese hamster): 100756703
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Entry
100756703 CDS
T02813
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like isoform X2
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100756703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cge04131
]
100756703
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cge04054
]
100756703
Membrane trafficking [BR:
cge04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
100756703
Pattern recognition receptors [BR:
cge04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100756703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
AAA_16
LRR_6
NPHP3_N
NB-ARC
AAA_22
nSTAND3
Zeta_toxin
AAA_14
AAA_5
Motif
Other DBs
NCBI-GeneID:
100756703
NCBI-ProteinID:
XP_027282659
UniProt:
A0A9J7JVH0
LinkDB
All DBs
Position
7:complement(84891032..84934462)
Genome browser
AA seq
1191 aa
AA seq
DB search
MEEAQSKKVGGTEETQHKGQQALDPTDDNWELQRIKIGAAKDLILRYTRPYMDPFIDEYT
STILRSGHEDWRSMTISDRYHIEIRENLYHTESWKTKDLLQNFTKLLLLQKSYPRRWETL
VRKSWHKSKGEERGHLIEIQDLFHPIPDTQEEPQLVILEGAAGIGKSMLARQVRRAWGEG
QLYRDHFQHVFYLSCRELAQCKQLSLAELIAKDQAVPSAPIRQILSHPEKLLFILDGIDE
PAWVLEMQNPELCLHWSQPQPVPMLLGSLLGKSILPGASLLLTARITDLRKFIPSLRQPR
WVEVLGFSKSGRKKYIYKYFTKKREAIAAVSLVKSNPVLSTLCMIPWVSWLVCTCLKQQM
EQGGDLSLTSQTTTTLCLEYLSQTLQGRALGTHLRELCSLAAEGIWRRRTLFREIDLQIR
GLTKDVIASFLVMGILQKHPRSRSYSFAHLCLQEFFATMSYILRYERSGYVGNIVGRLKE
LYGRHDLCEAPTMVFLFGLLSKQGIREIEKIFTCKLSWEAKLYLRWHILEETLCHQPYSL
RLLHCLYEIQDKEVLTEVMHNYEGANVHVPVDMGHPVFQTNVKHLVVQTDVDLMVVTFCI
KFCLHVKRLQMNGCEQQGPMLTAPTMVLSRWTPITNASWQVLFSTLEFTGSLEELDLSGN
LLSCFALRNLCRTLRYPGCHVKTLWLVNCGLTSRHCEDLTSVLKASSSLTELDLQLNDLG
DRGVKLLCEGLRNPACKLTILRLDQAPLSDQVIMELRTLETENPQLLISSIWKPHVMVPT
KNPDGEEMGDSLTSFKHQRLQSGHKHMEALGTENDFWGPAGPVATEVVDRERNLYRVQFP
VPGSYHCPSIGLCFVVTRAVTIEIEFCAWTQYLDQTHFRHRHMVAGPLFDIKAEQGAVAA
VYLPHFVALQEGQVDISLFCVAHFQEHGMVLETPARVEQHFAVLKNPSFSPMGVLVRMIP
AIRHFVPITSITLIYYHLNLKDVTLHLYLIPNDCTIRKAIDDEEMKFQFMRINKPPPQDS
FYIGSRYIISGSEKLEIMPTELVLCYRSPRESQLFSEIYVGHMDSRIKLQILDKKHKNLI
WEALLKPGDLRPAPLMIPAAQKDAPASLHFLDQYREQLVTRVTSVDPLLDKLHSLVLSEQ
EYEAVRAEATTQDKMRKLLSHSRSWTRACKDQVYRALNETHPHLIMDLLDK
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagctcagtccaagaaggtgggtggcactgaggagactcagcataagggtcaa
caggccttggaccccactgatgacaattgggagctgcagaggatcaaaattggggcagcg
aaggacttgatactaagatatacgagaccctacatggatccctttattgacgaatacacc
tcaacaatactgaggtcaggccatgaagattggagatcaatgacaatatcagacaggtat
cacattgaaataagagagaatctttaccacactgagtcctggaagacaaaggatttgctc
caaaatttcacaaagctactacttctgcaaaaatcctatccaagaaggtgggagaccttg
gtcaggaaaagctggcataaaagtaaaggagaggagagagggcatctgattgaaatccaa
gacttatttcacccaattccagacacccaggaagagcctcagctagtcatattagaggga
gctgctgggattgggaagtccatgttggccaggcaggtgaggagagcatggggggaaggc
cagctctacagggatcacttccagcatgtcttctacctcagctgcagagagctggcccag
tgcaagcagctgagtctggctgaactcatagccaaagaccaggctgtgccctcagctccc
atcaggcagatcctgtcccaccctgagaagctgctcttcatcctggatggcatagatgag
ccagcgtgggtcttggagatgcagaatcctgagctctgtctgcactggagccagccacag
ccagtgcctatgctgctgggcagtttgctgggaaaatccattctgcctggtgcttccttg
ctgctcacagctcggatcacagatctaaggaagttcattccttctttgaggcagccacgt
tgggtggaagtcctgggtttctctaagtctggacggaagaaatatatctacaaatatttc
acaaagaaaagagaggcaattgcagctgttagcttggttaaatcaaacccagtgctctca
acactgtgcatgattccctgggtgtcctggctggtctgcacttgcctgaagcagcagatg
gagcaagggggagacctctcactgacctcacagaccaccacaaccctctgcctagaatac
ctttcccagactcttcaaggtcgtgccctaggaacccatcttagagagctgtgctcactg
gctgctgaggggatctggagaagaaggaccctgttcagggaaatagatcttcagatccga
gggttaactaaggatgtcattgcctctttcctggtgatgggtatcctgcaaaagcatcct
cggtctcggagttacagctttgcccacttgtgtctccaggagttctttgcaaccatgtcc
tacattttgcgttatgagagaagtggttatgtgggaaatattgtaggacgactgaaggaa
ttatatggaagacatgacttgtgcgaggcacctaccatggtctttctatttggtcttttg
agtaaacagggaattagagaaatagagaagatctttacctgcaagttgagttgggaagca
aagttgtacctgcggtggcacatcctagaggaaaccctttgccatcaaccatattctctg
cgtttactccattgtctgtatgagatccaggataaggaggtcctgacagaagtgatgcac
aattatgaaggagcaaatgtgcatgtcccagtggatatgggacacccagtgttccagaca
aatgtgaagcacctggtggtccagacagacgtggacctcatggtggtcactttctgcatt
aagttctgcctccatgtgaagaggcttcagatgaatggttgcgaacagcagggaccaatg
ctgacggcccccacgatggttctgtccaggtggaccccaatcactaatgccagttggcag
gttctcttttccactcttgagttcacaggaagcctggaggagctggacctaagtggaaac
ctactgagctgctttgcactgcggaatctctgtaggaccctgagataccctggatgccat
gtaaagacactgtggcttgtcaactgtggcctcacatccagacactgtgaggacctgacc
tcagtgctcaaggccagctccagcctgactgagctcgacctgcagctaaatgacctgggt
gaccgtggggtgaagctgctgtgtgaggggctcaggaatcctgcctgtaaactcacaatc
ctgaggctggaccaggctcctctcagtgaccaggtgataatggagctcaggaccctggag
acagagaatccacagctgctcatctccagcatatggaagccccatgtgatggtccctact
aagaacccagatggagaagaaatgggtgatagcctgacttcattcaagcatcagagacta
cagtcaggacacaagcacatggaagcactgggaactgaaaatgacttctggggccctgca
gggcctgtggctactgaagtggttgacagagagaggaacctataccgagttcaattccca
gtgcctggttcctaccactgtcccagcataggactctgctttgtggtgacaagggcagtg
acaatcgagattgaattctgtgcctggacccaatacctggaccagactcactttcgacac
aggcacatggtggctgggcctctgtttgacatcaaggctgagcagggagctgtggctgct
gtgtaccttcctcattttgtggctctccaagagggacaagtggacatctctttgttctgt
gtggctcactttcaagaacatggtatggtcctagaaactccagccagggtggagcagcat
ttcgcagtactgaaaaacccaagcttctccccaatgggagttctagtgagaatgatccct
gctatccgacactttgttcccatcacttccatcacactgatctactatcacctcaatctc
aaggacgtcacccttcatctctacctgatccccaatgactgcaccattcggaaggccatt
gatgatgaagaaatgaagttccaattcatgcgaataaataagccacccccacaagactca
ttttacattggctcacgctacatcatttctggttctgagaaactggaaatcatgccaacg
gaactggtattatgctacaggagccccagggaatcccagctcttctctgaaatctacgtt
ggccatatggattcaaggattaagctgcaaatcttagacaagaagcataagaatctcata
tgggaagccttgctgaaaccaggagacctcagacctgcaccactcatgatccctgcagcc
cagaaagatgctcctgcctcactacacttcctggaccagtatcgggagcagctggtgact
cgagtgacatctgtggaccctctcttggacaagctgcatagtctggtgctgagtgaacag
gagtatgaggcagtgcgggctgaagccaccacccaagacaagatgaggaagctcttgagc
cacagccggtcctggaccagggcctgcaaagaccaagtctaccgagctctgaacgagacc
catcctcacctgatcatggacctccttgacaagtag
DBGET
integrated database retrieval system
