Cricetulus griseus (Chinese hamster): 100756987
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Entry
100756987 CDS
T02813
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a isoform X3
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100756987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cge04131
]
100756987
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cge04054
]
100756987
Membrane trafficking [BR:
cge04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
100756987
Pattern recognition receptors [BR:
cge04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100756987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
LRR_6
AAA_16
NB-ARC
NPHP3_N
AAA_14
IL2
nSTAND3
AAA_22
Zeta_toxin
AAA_30
nSTAND_NTPase4
LRR_1
Motif
Other DBs
NCBI-GeneID:
100756987
NCBI-ProteinID:
XP_027282652
UniProt:
A0A9J7GFA0
LinkDB
All DBs
Position
7:complement(84940697..85024060)
Genome browser
AA seq
1470 aa
AA seq
DB search
MGAALSKIVGGTKEAQHKDKQVLDPDYEMREPINLEVQRTKAEAEKDLMQSSTFTPYMDT
TTILVDIAKHLSRIGDEAHPNIRAELADIDKNSLTSCLEQQQKGEVKQDQCGLHSQASPQ
DSVTMEEAQSKKVGDTKGALYECQQVLDPNHFMKKKLDLMLQRIKAEEEKDLKLSTAITP
YVEPGTLESSLQLLCSSIRKLIHFQMSGSTFTTYKDRILLQCSLQLLSAILKNRRHIPMS
GSETTHYMNPTPLQTSLQLLRSGLEDLREILMSDLTIKCYMDPTTLQDSLQLLDSSLENL
NEILILGLSSSFPSSTMKHFMDHSTLESSFHLLSSSLENLGKMLMSEMHHKEGRENLYHT
ESWKMEDFLQNFTHLLLLLKPCPRGWKTLNRKSLHETKGEEKGHLIEMEDLFNPNLDTQE
EPQLVILEGAAGIGKSTLARQVRRAWGKGQLYRDRFQHVFYFNCRELAQCKQLSLAELIA
KDQAVSSAPIRQILSHPEKLLFILDGIDEPAWVLEMQNPEFCLHWSQPQPVPMLLGSLLG
KSILPGASLLLTTRITDLRKFIPSLGQPRWVEVLGFSKSGRKKYIYKYFTKKREAIAAVS
LVKSNPVLSALCVVPWVSWLVCTCLKQQMKQGIDLSLTSQTTTALCLKYLSLTLPGHSLE
TQLRRLCSLAAEGIFRKRTLFSERDLQIQGLDNDVITTFLKMGVLQKQPRSLYYSFAHLC
LQEFFAAMSCILYFNENTSDHTEFYSIVQALKEGYGRHDLFEAPTMRFLFGLLSEKEMRK
IWNIFPCKWSRETMLHLQRYIQKEALLHQPYSLGLLHCLYEIQDKDFVAEVMNNYQETRV
HTPVDMEHPEFQTGVMYMVVQTDVDLMVVTFCIKFCCRVKRLQMNASGQQRKISKSPKIV
LSRWTPMTNASWQVLFSMLEFTGSLEELDLSGNPLSNSALQSLCRTLRCPGCHLKTLWLL
NCGLTSRHCEDLTSVLWASSSLTELDLQLNDLGDHGVRLLCEGLRNPACNLRILRLDQDP
LSDQVMMELRALEAENPQMLISSTLNPPVMDPTKNMDGEEMGDSLTSFKQQRLQSGHKHM
EPLGTEDDFWGPTGPVATEVVDRERNLYRVQFPVAGSYHCPNIGLRFVVTRAVTIKIEFC
AWSQYLNETPLLHSHMVAGPLFDIKADQEAVATVYLPHFVTLQEGQVDISLFQVAHFQEH
GMILETPARVEQHYAVLENPSFSPVGVLVRMIPAVGHFIPITSITLIYYPLNLKDVTLHL
YLIPNDCTIRKAIDEEEMKFWFVRIHKPPPVDSLYIGSRYIVSASKRLKIIPKELELCYR
SPGESQLFSEIHVGHMGSEINLQIRDKKHRNLIWEALVKPGDLSPAPPVTPVAHKDAPAS
LHFLDQHREQLVARVTSVDPLLDKLHSLVLSEEEYEAVRAEATTQDKMRKLFSFSRSWTR
TCKDQVYQALNEIHPHLIMDLLKKSRRVSV
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagctctgtccaagatagtgggtggcaccaaggaggctcaacataaggataaa
caggtcttggaccctgactacgagatgagagagccaataaacctggaagtgcagagaacg
aaagccgaggcagagaaggacttgatgcaaagctcaacattcacaccttacatggatacc
actacaatcttagttgacattgcaaaacacctttcaagaattggggatgaagcacatccc
aatatcagagcagaattggctgacatagacaaaaattcactgacctcctgtctggagcaa
cagcagaagggagaagtgaagcaggaccagtgtggcctacacagccaagcatcacctcag
gactctgttaccatggaagaagctcagtccaagaaggtgggtgacactaagggagctctg
tatgagtgtcagcaggtcttggaccccaaccatttcatgaagaagaagttggacctgatg
ctgcagaggatcaaggccgaggaagaaaaggacttgaagctaagcacagcaatcactccc
tatgtggaacctggtaccctcgaaagctccttacaactactgtgctcaagcattagaaaa
ctgatacactttcagatgtcaggctcaacattcacaacttacaaggatcgcattctcctc
caatgctctttacagctactgagcgcaatcctcaaaaatcggagacacattccgatgtca
ggctcagaaactacacactacatgaatcccactcccctccaaacctccttacaactactg
agatcaggacttgaagatctgagagaaattctgatgtcagacttaacaatcaagtgctac
atggatcccactacactccaagattccttacaactactggattcaagtcttgaaaatctt
aatgaaattctgatattaggcctttcttcatcatttccaagctcaacaatgaaacacttc
atggatcacagtaccctcgaaagctccttccacctactaagctcaagccttgaaaatctg
ggaaaaatgttgatgtcagaaatgcatcacaaagaaggaagagagaatctttatcacact
gagtcctggaaaatggaggatttcctacagaatttcacacacctattacttttactaaaa
ccttgcccaagaggctggaagaccttgaacagaaaaagcttgcatgaaacaaaaggagag
gagaaaggacatctgattgagatggaagacttatttaatccaaacctagatacccaggaa
gagcctcagttggtcatattagagggggctgctgggattgggaagtcaacactggccagg
caggtaagaagggcatggggaaaaggccagctctacagagatcgcttccagcatgtcttc
tatttcaactgcagagagctggcccagtgcaaacagctgagtctggctgaactcatagcc
aaagaccaggctgtgtcctcagctcctatcaggcagatcctgtctcaccctgagaagctg
ctcttcatcctggatggcatagatgagccagcatgggtcttggagatgcagaatcctgag
ttctgtctgcactggagccagccacagccagtgcctatgctgctgggcagtttgctggga
aaatccattctgccgggtgcttccttgctgctcacaactcggatcacagatctacggaag
ttcattccttctttggggcagccacgttgggtggaagtcctgggtttctccaagtctgga
cggaagaaatatatctacaaatatttcacaaagaaaagagaggcaattgcagctgttagc
ttggttaaatcaaacccagtgctctcagcactgtgtgtggtgccctgggtgtcctggctg
gtctgcacttgcctgaagcagcagatgaaacagggaatagatctctcactgacctcacag
accaccacagccctctgcctgaaatacctttccctgactcttccagggcattccctggag
acacagctcagaaggctctgctcactggctgctgaggggatcttcagaaaaaggaccctg
ttcagtgagagagaccttcagatccaagggttagataatgatgtcattaccactttcttg
aagatgggtgtccttcagaagcagcccaggtctctgtactacagctttgctcacttgtgt
ctccaggagttctttgcagcaatgtcctgcatcttgtattttaatgagaacacaagtgat
catacagaattctacagtattgtgcaagcactgaaggaaggctatggaagacatgacctg
tttgaggcacccactatgcgctttctatttggtcttttaagtgaaaaggaaatgagaaaa
atttggaatatcttcccctgcaaatggagtagggaaacaatgttgcacctgcaaaggtat
atccaaaaggaagccctactccatcaaccatattctctgggtttactccattgtctgtat
gaaattcaggataaagatttcgtggcagaagtgatgaacaattatcaagaaacaagggtg
cataccccagtggatatggagcacccagagttccagacaggagtgatgtacatggtggtc
cagacagacgtggacctcatggtggtcactttctgcattaagttctgctgccgtgtaaag
aggcttcagatgaatgcgagtggacagcagagaaaaatctcaaagtcccccaagatagtt
ctgtctagatggaccccaatgactaatgccagttggcaggttctcttctccatgcttgag
ttcacaggaagcctagaggagctggacctaagtggaaacccactgagcaactctgcactg
cagagtctttgtaggaccctgagatgccctggatgtcacctaaagacattatggcttctc
aactgtggcctcacatccagacactgtgaggacctgacctcagtgctctgggccagctcc
agcctgactgagctcgacctgcagctaaatgacctgggcgaccatggggtgaggctgctg
tgtgaagggctcaggaatcctgcctgcaacctcagaatcctgaggctggaccaggaccct
ctcagtgaccaggtgatgatggagctcagggccctggaggcagagaatccacagatgctc
atctctagcacattgaatccacctgtgatggaccctactaagaacatggatggagaagaa
atgggtgatagcttgacctcattcaagcagcagagactacagtcgggacacaagcacatg
gaaccactggggactgaagatgacttctggggccctacagggccagtggctactgaggtg
gttgacagagaaaggaacctgtaccgagttcagtttcctgtggctggttcctaccactgt
cccaacataggacttcgctttgtggtgacaagggcagtgacaatcaagattgaattctgt
gcctggagccaatacctgaatgaaactcccttgctgcacagtcatatggtggctgggcct
ctgtttgacatcaaggctgatcaggaagctgtggctactgtgtacctccctcattttgtg
actctccaagagggacaggtggacatctccttgttccaggtggctcactttcaagaacat
gggatgatcctagaaactccagccagggtggagcagcactacgcagtactggaaaaccca
agcttctccccagtgggagttctagtgagaatgatccctgctgtaggacacttcatcccc
atcacttccatcacactgatctactatcctctcaatctcaaggatgtcacccttcatctc
tacctgatccccaatgactgcaccattcggaaggccattgatgaggaagagatgaagttt
tggtttgttcgaatacacaagccacccccagtagactctctttatattggttcacgctac
attgtgtctgcttccaagaggctgaaaatcatcccaaaggaactagagctgtgctacagg
agccctggggaatcccagctcttctctgagatccacgttggtcacatgggttcagaaatt
aatctgcaaatccgagacaagaagcataggaatctcatatgggaagccttggtgaaacca
ggggacctcagtcctgcaccacccgtgacccctgtagcccacaaagatgctcctgcctca
ctacacttcctagaccagcatcgggagcagctggtggcccgagtgacatcagtggaccct
ctcttggacaagctgcatagtctggtgctgagtgaagaggagtatgaggcagtgcgggct
gaagccaccacccaagacaagatgaggaagctcttcagcttcagccggtcctggaccagg
acctgcaaagaccaagtctaccaagctctgaacgagatccatcctcacctgatcatggac
ctcctgaaaaagtctcgcagggtctctgtgtga
DBGET
integrated database retrieval system
