Cricetulus griseus (Chinese hamster): 100760878 Help Entry 100760878         CDS       T02813                                  Symbol Thbs1 Name (RefSeq) thrombospondin-1 isoform X1   KO K16857   thrombospondin 1 Organism cge  Cricetulus griseus (Chinese hamster) Pathway cge04015   Rap1 signaling pathway cge04115   p53 signaling pathway cge04145   Phagosome cge04148   Efferocytosis cge04151   PI3K-Akt signaling pathway cge04350   TGF-beta signaling pathway cge04510   Focal adhesion cge04512   ECM-receptor interaction cge04820   Cytoskeleton in muscle cells cge05144   Malaria cge05165   Human papillomavirus infection cge05205   Proteoglycans in cancer cge05206   MicroRNAs in cancer cge05219   Bladder cancer Brite KEGG Orthology (KO) [BR:cge00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     100760878 (Thbs1)    04350 TGF-beta signaling pathway     100760878 (Thbs1)    04151 PI3K-Akt signaling pathway     100760878 (Thbs1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100760878 (Thbs1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     100760878 (Thbs1)    04148 Efferocytosis     100760878 (Thbs1)   09143 Cell growth and death    04115 p53 signaling pathway     100760878 (Thbs1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     100760878 (Thbs1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     100760878 (Thbs1)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     100760878 (Thbs1)    05205 Proteoglycans in cancer     100760878 (Thbs1)   09162 Cancer: specific types    05219 Bladder cancer     100760878 (Thbs1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     100760878 (Thbs1)   09174 Infectious disease: parasitic    05144 Malaria     100760878 (Thbs1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cge04131]     100760878 (Thbs1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cge00536]     100760878 (Thbs1) Membrane trafficking [BR:cge04131]  Endocytosis   Phagocytosis    Opsonins     100760878 (Thbs1) Glycosaminoglycan binding proteins [BR:cge00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100760878 (Thbs1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 Laminin_G_2 cEGF TSP1_ADAMTS Laminin_G_3 TSP1_CCN EGF Laminin_G_1 Motif Other DBs NCBI-GeneID:  100760878 NCBI-ProteinID:  XP_027278025 UniProt:  A0A8C2LCT4 LinkDB All DBs Position 6:complement(60390487..60406331) Genome browser AA seq 1171 aa AA seqDB search MELAWGLGVLFLLHVCGSNRIPESGGDNSVFDIFEIIGAARKGSGRRLVKGLDLSSPAFR IENANLIPPVPDDKFQDLLDAVWADKGFIFLASLRQMKKTRGTLLAVERKDHTGQIFSVV SNGKAGTLDLSLSLPGKQQVVSVEEAHLATGQWKSITLFVQEDRAQLYIDCEKMESAELD VPIQNIFTRDLASVARLRVAKGDVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSATNVL LTLDNNVVNGSSPAIRTNYIGHKTKDLQAICGLSCDELSSMVLELRGLRTIVTTLQDSIR KVTEENRELASELRRPPLCFHNGVQYRNNEEWTVDSCTECHCQNSVTICKKVSCPIMPCS NATVPDGECCPRCWPSDSADDGWSPWSEWTSCSATCGNGIQQRGRSCDSLNNRCEGSSVQ TRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEAR ETKACKKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDVTENQ VCNKQDCPIDGCLSNPCFAGAKCTSYPDGSWKCGACPPGYSGNGIQCKDVDECKEVPDAC FNHNGEHRCKNTDPGYNCLPCPPRFTGSQPFGRGVEHAMANKQVCNPRNPCTDGTHDCNK NAKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCP NLPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPY NHNPDQADTDNNGEGDACAVDIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLE HNPDQLDSDSDLIGDTCDNNQDIDEDGHQNNMDNCPYVPNANQADHDKDGKGDACDHDDD NDGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDIDDICPENVDISETDFRR FQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERD DDYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNA LWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMADSGPIY DKTYAGGRLGLFVFSQEMVFFSDMKYECRDS NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atggagctggcctggggactaggtgtccttttcctgttgcatgtgtgtggcagcaaccgc attccagagtctgggggagacaacagtgtctttgacatctttgaaatcattggagctgcc cgcaagggctccggccgacgactggtaaagggccttgacctgtccagcccagctttccgg attgaaaacgccaacctgattccccctgtgcctgatgacaagttccaagacctactggat gctgtgtgggctgacaaaggcttcatcttcctggcttccttgaggcagatgaagaagact cggggcacactcctggccgtggagcggaaagatcatactggccagatcttcagtgtggtc tccaacggcaaagcaggcaccctggacctgagtctgagtctgccaggcaagcaacaagtg gtgtcagtagaggaagctcacctggccactggccagtggaagagcatcactctctttgtg caagaagacagggcccaactctacattgactgtgagaagatggagagcgctgagctggat gtgcccatccagaacatctttaccagagatttggccagtgtcgccaggctccgagttgca aagggagatgtcaatgacaactttcagggggtgctgcagaatgtgaggtttgtctttgga accaccccagaagacattctcaggaacaaaggctgctccagctcagctaccaatgtcctc ctcacccttgacaacaacgtggtaaatggttccagccctgctatccgcaccaactacatt ggccacaaaacaaaggacctgcaagccatctgtggcctctcttgtgacgaactatcgagc atggtcctggaactcaggggcctgcgcaccatcgtgaccacactccaggacagcatccgc aaagtgacggaagagaacagagagctggccagtgagctgaggcggcctcccctctgcttc cacaacggagtccagtacaggaacaatgaggagtggaccgtagacagctgcaccgagtgt cactgccagaattcagttaccatctgcaaaaaggtgtcctgccccatcatgccctgctcc aacgccactgttcctgatggagaatgctgcccacggtgttggcccagcgattctgctgat gacggctggtccccctggtctgagtggacttcctgctctgcaacatgtggcaatggaatt cagcaacgtggtcgctcctgtgacagcctcaacaacagatgtgagggctcttcagtacag acaaggacctgccacatccaggagtgtgacaagagatttaagcaggatggtggctggagt cactggtccccatggtcatcttgttctgtgacctgtggtgatggtgttatcacaaggatc cggctctgcaactctcccagcccccagatgaacgggaagccctgtgaaggtgaagctcgg gagaccaaagcctgcaagaaagacgcctgcccaatcaatggaggctggggtccctggtca ccatgggacatctgctctgtcacctgtggaggaggagtgcagaaacgcagccgactctgt aacaaccccacaccccagtttggtggcaaagactgtgttggtgatgtgactgaaaatcaa gtttgcaacaagcaggactgtccaattgatggatgcctgtccaatccctgctttgctggt gccaagtgtactagctatcctgatggtagctggaaatgtggtgcatgtcctcctggctac agtggaaatggcatccagtgcaaagatgtcgatgagtgcaaagaagtgcctgatgcctgc ttcaatcacaatggagaacatcggtgtaagaacacagaccctggctacaattgccttccc tgcccaccacgattcactggctcacagccctttggccgaggtgtcgaacatgctatggcc aacaaacaggtgtgcaatccacggaacccctgcacagatgggacacacgactgcaacaag aatgccaagtgcaactacctgggccattacagcgaccccatgtaccgctgtgagtgcaag cctggctatgcaggcaatggcatcatctgtggcgaggacacagacctcgacggctggcct aatgaggacctggtgtgtgtggccaatgcaacttaccactgcaaaaaggacaactgtccc aaccttcccaactcaggacaagaagactatgacaaagacggaattggcgatgcctgtgat gacgatgatgacaatgacaaaatcccagatgatagggacaactgcccattccattacaac ccagcccagtatgactatgacagagatgatgtgggagaccgctgtgacaactgcccctac aaccacaaccctgaccaagcagacacagacaacaatggagagggagacgcctgtgctgtg gacatcgatggagatggaatcctcaatgaacgagacaactgccagtatgtgtacaatgtg gaccagagggacaccgacatggatggagttggagatcagtgtgacaactgccccctggaa cacaatccagaccagctggactctgactcagacctcattggggacacctgtgacaacaat caggacattgatgaggatggccatcagaataatatggacaactgtccctacgtgcctaat gccaaccaggctgaccatgataaagatggcaaaggagatgcctgtgaccacgatgatgac aacgatggcattcctgatgacagggacaactgcaggctggtgcccaatcctgaccagaag gactctgatggtgatggcagaggtgatgcctgcaaagatgactttgaccatgataatgtg ccagacattgatgacatctgtcctgagaatgttgacatcagtgaaaccgatttccgccgg ttccagatgattcctctggatcccaaaggaacctcccagaatgaccctaactgggttgta cgccatcagggcaaagaacttgtccaaactgtaaactgtgatcctggtcttgctgtaggt tatgatgagtttaatgccgtggactttagtggtaccttcttcatcaacactgagagagat gacgactatgctggctttgtgtttggctaccagtccagcagccgcttctatgttgtgatg tggaaacaagttacccagtcctactgggacaccaaccccacaagggctcagggatattca ggcctgtctgtaaaggttgtgaattccaccacagggcctggcgagcacctgcggaatgct ctgtggcacacaggaaacacccctggccaggtgcgcaccctgtggcatgaccctcgtcac ataggctggaaggatttcactgcttacagatggcgtctcagccacaggccaaagacaggt tacatcagagtggtgatgtatgaaggaaagaaaatcatggccgactcaggacccatctat gataaaacctacgccggtggtagactaggcctgtttgtcttctctcaagaaatggtgttc ttctcagacatgaaatacgaatgtcgagattcctaa

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