Cricetulus griseus (Chinese hamster): 100765697
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Entry
100765697 CDS
T02813
Symbol
Setdb1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X2
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge00310
Lysine degradation
cge01100
Metabolic pathways
cge04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100765697 (Setdb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100765697 (Setdb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cge03036
]
100765697 (Setdb1)
Enzymes [BR:
cge01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
100765697 (Setdb1)
Chromosome and associated proteins [BR:
cge03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100765697 (Setdb1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100765697 (Setdb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
MBD
Tudor_5
Pre-SET
Chromo_MORC2_6th
DUF4537
53-BP1_Tudor
Motif
Other DBs
NCBI-GeneID:
100765697
NCBI-ProteinID:
XP_027249417
UniProt:
A0A8C2LUV4
LinkDB
All DBs
Position
1
Genome browser
AA seq
1284 aa
AA seq
DB search
MSSLPGCVSLDAATAAPDSEDMTELQQAVVEELGISMEELRQFIDEELEKMDCIQQRKKQ
LAELETWVLQKESEVAYVDQLLDDASRAVINCESLVKDFYSKLGLQYHDSSSEDEASQPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
NKGTLGQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGLGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDSSCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASAMEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKLTEPPQPIATPAPPAALPLSPQAGDTESLESQL
AQSRKQVAKKSTSFRPGSVGSGHSSPASPTLSESVTAGKLGINQTYRSPLASVASTPTPA
APPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRIRPMRNEQYRGKNPLLVPLLY
DFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLDPYVLV
DRKFQPFKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGPEFL
VGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYECNKRCK
CDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEG
LEMGDEYFANLDHIESVENFKEGYESDVASSSDSSGVDMKDQEDGNSGSEDPEESNDDSS
DDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEVASKDSRPPDLGPPNVPVPPAVSVG
GCKPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKNSERGDGRAGAGRAEAEKAST
SGLSFKDEGDNKQTKKEDPDDRNKMSVVTESSQNYGHNPPMKSDGLRRPSSKTSMPQSRR
LGASTQSNPDDILTLSSSTESEGESGISRKPTAGQTSATAVDSDDIQTISSGSDGDDYED
KKNLTGPTKRQVAVKSTRGFALKSTHGIAIKSTNMASVDKGESAPVRKNTRQFYDGEESC
YIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNY
EVGSVEGKELLCCCGAIECRGRLL
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgcgttagtttggatgcagcaacagctgcccctgactctgaa
gacatgactgagctgcagcaggcagtggttgaagagctgggtatctctatggaggaactt
cgccagttcattgatgaagagctggaaaagatggactgtatacagcagcgcaagaagcag
ctagcagagttggagacgtgggtgctgcagaaggagtctgaggtggcttatgttgaccag
ctccttgatgatgcatccagggcagtgattaattgtgagtctttggtgaaggatttctac
tctaagctgggactgcagtatcatgacagtagctccgaggatgaagcttcccagcctaca
gaaataattgagattcctgatgaagatgatgatgtcctcagtattgattcaggtgatgct
ggaagcagaactccgaaagaccagaagctccgtgaagctatggctgccttaagaaaatca
gctcaagatgtccagaagttcatggatgctgtcaacaagaaaagcagttcccaggatcta
aataaaggaaccttgggtcagatgtctggagaactgagcaaagatggggacctgatagtc
agtatgcggattctgggcaagaagaggactaagacatggcacaaaggcacccttattgcc
atccagactgttgggctgggaaagaaatacaaagtgaaatttgacaacaaagggaagagt
ctgctgtctggcaaccacattgcctatgattatcaccctcctgctgacaagctgtttgtg
ggcagtcgcgtggtagccaaatacaaagatggaaatcaggtctggctttatgctggcatt
gtagctgagactcccaacgtcaagaacaagctcagatttctgattttctttgatgatggt
tatgcctcctatgtcactcagtcagaactgtatcccatttgccgaccattgaaaaagacc
tgggaggacatagaagacagctcctgccgagacttcatagaggaatatatcactgcctac
ccaaaccgccccatggtacttctcaagagtggccagcttattaagactgagtgggaaggc
acatggtggaaatctcgagttgaagaggtggatggcagcctagtcaggatcctctttctg
gatgacaagagatgtgagtggatctatcgaggctctacacgcctggaacccatgttcagt
atgaagacatcatcagcttctgcaatggagaagaagcaagggggacaattgagaacccgt
cctaatatgggtgctgtgaggagcaaaggtcctgttgttcagtatacacaggacctaacc
agcactggaacccagttcaagctcacggagcccccacagcccatagctacaccggccccc
cctgctgcacttcctctttccccacaagcaggtgacactgaaagcttagaaagccaactt
gctcagtcacggaagcaagtggccaaaaagagcacatcgtttcggccaggatctgtgggt
tctggccattcctcccctgcttcgcccacactcagtgaaagtgtaactgctgggaaactt
gggatcaaccagacatacagatcgcctttggcctcagtagcatctactccaacacctgca
gcccctccagccttccatggcatgttagagcgggcaccagctgagccttcctaccgagcc
cccatggagaagcttttctatttacctcatgtctgcagttacacttgtctgtcccggatc
agacccatgaggaatgaacagtaccggggcaagaatcccctcttagtaccgctgctatat
gacttccgtaggatgacagcccggcgtagagttaaccgcaaaatgggcttccatgttatc
tataagacaccctgtggtctctgtcttcggacaatgcaggaaatagaacgctaccttttt
gagactggctgtgacttcctgttcctggagatgttctgtttggatccatacgttcttgtc
gacagaaagtttcagccttttaagcctttttactatattttggacatcacctacggcaag
gaagatgttcccctgtcctgtgttaatgagattgacacaactcccccaccccaggtggcc
tacagcaaggagcgcatccctggcaagggtgttttcattaacacaggccctgaatttctg
gttggctgtgactgcaaggatgggtgtcgggataaatctaaatgtgcctgccatcagcta
actatccaagccacagcatgtaccccaggaggccaaatcaaccctaactctggctaccag
tacaaaaggcttgaagagtgtctgcctacaggggtttatgagtgtaacaaacgctgcaaa
tgtgacccaaacatgtgcacaaatcgcttggtgcaacatggactacaggttcgactacag
ctatttaagacacagaacaagggctggggtatccgctgcttggatgacattgccaaaggc
tcttttgtctgtatttatgcaggcaaaatcctgacagatgattttgcagacaaagaaggg
ctggagatgggtgatgagtactttgcaaatctggaccacattgaaagtgtggagaatttt
aaggaaggatatgagagtgatgtcgccagttcatctgacagcagtggggtggacatgaag
gaccaggaagatggcaacagcggttcagaggatcctgaagagtccaatgatgacagctct
gatgataacttctgtaaggatgaagacttcagcaccagctcagtgtggcgtagctatgct
acccggagacagactcggggtcagaaggaaaacggactgtctgaggtggcttccaaggac
tcccgtcccccagaccttgggcctccaaatgttcctgtccctcctgcagtatctgtaggg
ggctgcaagccaccttcatctgaagagacccccaagaacaaggtggcctcgtggttgagc
tgcaacagtgtcagtgaaggtgggtttgctgattctgacagccgttcttccttcaagaat
agtgagcgtggagatggccgggctggggcaggccgggcagaggctgagaaggcctctacc
tcaggattgagcttcaaggatgaaggagacaataagcagactaagaaagaggatcctgat
gaccgaaacaagatgtcagtagtcactgaaagctctcagaattatggacacaatcctcct
atgaagtctgatgggcttcgccgaccatctagtaaaacttctatgccccaaagtcggcga
cttggggcttctactcagtccaaccctgatgatatcctgacactgtccagcagcacagaa
agtgagggggaaagtggaatcagccgaaagcccactgctggtcagacttctgccacagct
gttgacagtgatgacatccagaccatctcctctggctctgatggcgatgactatgaggac
aaaaaaaacttgactggtccaacgaagcgccaggtggcagtaaaatcaacccgaggcttt
gctcttaaatcaacccatgggattgctattaaatcaaccaacatggcttctgtggacaag
ggggagagtgcaccagttcgtaagaacacacgccagttctatgatggtgaagagtcttgc
tacatcattgatgccaaacttgaaggcaacctaggccgctacctcaatcacagttgtagc
cccaacctgtttgtccagaatgtcttcgtggatactcacgatcttcgcttcccttgggtg
gccttctttgccagcaagaggatccgggctggaacagagcttacttgggactacaactac
gaagtgggcagtgtggaaggcaaagagctgctgtgctgctgtggggccattgagtgcaga
ggacgtcttctctaa
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integrated database retrieval system
