Cricetulus griseus (Chinese hamster): 100768387
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Entry
100768387 CDS
T02813
Symbol
Abcd4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X3
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge02010
ABC transporters
cge04146
Peroxisome
cge04977
Vitamin digestion and absorption
cge04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100768387 (Abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100768387 (Abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
100768387 (Abcd4)
04980 Cobalamin transport and metabolism
100768387 (Abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cge04131
]
100768387 (Abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cge02000
]
100768387 (Abcd4)
Enzymes [BR:
cge01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
100768387 (Abcd4)
Membrane trafficking [BR:
cge04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
100768387 (Abcd4)
Transporters [BR:
cge02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
100768387 (Abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_16
AAA_22
AAA_30
DLIC
AAA_29
AAA_7
T2SSE
AAA_23
nSTAND3
CoV_E
Motif
Other DBs
NCBI-GeneID:
100768387
NCBI-ProteinID:
XP_027274313
UniProt:
A0A9J7G483
LinkDB
All DBs
Position
5:119144835..119159953
Genome browser
AA seq
617 aa
AA seq
DB search
MAVPGPATRAGARPRLDLQLVQRFLRIQKVFFPSWSSQNVLMFMTLLCVTLLEQLVIYQV
GLIPSQYYGVLGNKDLDGFKALTFLAVALIVLNSTLKSFDQYTCNLLYVSWRKDLTEHLH
NLYFRARVYYTLNVLRDDIDNPDQRISQDVDRFCRQLSSMTSKLIISPFTLAYYTYQCFQ
STGWLGPVSIFGYFLLGTMVNKTLMGPIVTKLVQQEKLEGDFRFKHMQIRVNAEPAAFYR
AGLVEHMRTDRRLQRLLQTQRELMSRELWLYIGINTFDYLGGILSYVVIAIPIFSGIHGD
LSPTELSTLVSKNAFVCIYLINCFTQLIDLSTTFSDVAGYTHRIGELQEALLDMSRKSQD
CESLGESEWDLSKASGWPIAEPSDTAFLLDRVSIVAPSSDKPLIKDLSLKVCEGQSLLIT
GNTGTGKTSLLRVLGGLWESMKGLPMEASVGSAGSVQMLADFGPHGVLFLPQKPFFTDGT
LREQVIYPLKEIYPDSGSADDERIMRFLELAGLSSLVARTGGLDQQVDWNWYDVLSPGEM
QRLSFARLFYLQPKYAVLDEATSALTEEVESELYRIGQQLGMTFISVGHRPSLEKFHSWV
LKLCGGGRWELTRIKME
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcccagggcccgcaacccgagcaggcgccaggcccagattagatctgcaactt
gtccagcggttcctgaggatacagaaggttttctttccttcgtggtcatcacagaatgtc
ttaatgttcatgacactcttgtgtgtgaccctcctggagcaactggtgatctaccaagtt
ggcttgatccccagtcagtattatggggtcttgggaaacaaagacctggatggatttaag
gcactgaccttcctggctgtggctctcattgttctcaactccacgctgaagagctttgac
cagtacacctgcaacctgctgtatgtgagctggaggaaggacctcacagagcatctgcat
aacctgtacttccgggcccgcgtctactataccctcaacgtgctgcgggatgacatcgat
aatccggaccagcgcatcagccaggatgtggatcggttctgccggcagctcagcagcatg
accagcaagctaatcatctcacccttcactctggcctactacacataccagtgcttccaa
agcacaggctggcttggacctgtgagcatctttggatatttcctcctgggaaccatggtg
aacaaaactttgatggggcccatcgtgacgaagctggtgcagcaggagaagctggagggg
gattttaggtttaagcacatgcagattcgagtgaacgctgagcccgccgctttctacaga
gctgggctcgtagagcacatgaggacggaccgcaggctgcagagactccttcaaacccag
agagagctgatgtccagagagctctggctctacattggcatcaacacctttgactatctg
ggcggcattctgagttatgttgtcatcgcaatccccattttcagtgggatccatggagac
ctgagccccacagagcttagcaccctggtcagcaagaatgcctttgtgtgtatctacctc
atcaactgcttcacccagctcattgacctgtctaccacattctcagatgtcgctggttac
acgcacaggattggagagcttcaggaggccctgctggacatgtcccgaaaatcacaagac
tgtgagagcctaggcgagagtgagtgggatttgagcaaggcctcagggtggccaatcgca
gagccatcagacacagcttttctgctggatcgggtttccatcgttgccccctcctctgat
aagccactgatcaaggacctgagcctgaaggtctgtgaagggcagagtctgctcatcaca
ggcaacacaggcactggcaagacctccctgctgcgggtgctgggaggcctgtgggagagc
atgaaaggtctcccaatggaggcttctgtgggctctgcaggctcagtgcagatgctggct
gattttgggccccacggggtgctgttcctgccacagaagccattcttcactgatgggaca
cttcgggagcaggtgatatatcccctgaaggagatctaccctgattcaggttctgctgat
gatgagaggatcatgaggttcttggaattggcaggcctgtccagcttggtggcaaggaca
ggcggtctggaccagcaggtggattggaactggtatgatgtcctgtccccaggggagatg
caaagactgtccttcgctcgcctcttctacctgcagccaaagtatgcagtgcttgatgaa
gccaccagtgccctgacagaggaagtggagagtgaactctaccgcattggccagcaactg
gggatgacatttatcagcgtgggacatcggcccagccttgagaagtttcactcctgggtt
ctgaaactctgtggaggaggaaggtgggaactgactagaatcaaaatggaatga
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