Cricetulus griseus (Chinese hamster): 100772476
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Entry
100772476 CDS
T02813
Symbol
Apobec3b
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3B isoform X1
KO
K18750
C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03250
Viral life cycle - HIV-1
cge05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100772476 (Apobec3b)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100772476 (Apobec3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100772476 (Apobec3b)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100772476 (Apobec3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NAD2
APOBEC2
NAD1
APOBEC_N
SNAD4
APOBEC3
APOBEC_C
APOBEC4_like
APOBEC4
APOBEC1
dCMP_cyt_deam_1
Toxin-deaminase
MafB19-deam
DUF7136
Motif
Other DBs
NCBI-GeneID:
100772476
NCBI-ProteinID:
XP_027259829
UniProt:
G3I2J2
LinkDB
All DBs
Position
2:377050000..377067744
Genome browser
AA seq
413 aa
AA seq
DB search
MQPQREGPRTGMEPACLGCCHRKPYSPIRNPIKMLYQRTFYFHFKNLRYANLRKNTFLCY
EVNRMECNELVPLCQGVFRKESINLHAEVCFLYWFHTQVLGVLPPDEKYKITWYVSWSPC
NECAEKVASFLDTHRNLSLAIFSSRLYYFWDPDYQDKLRRLNQAGAQIAAMDFPEFEKCW
NKFVDNDGKSFRPWKRLKINFRFQDNKLRDILRNPVSLLREDIFSLQFNNRHRVKPVQHR
YYQRKTYLCYLLEQHNGQQPLKGCLQNKKGKHAEILFIDEMRSLELGQVQITCYLTWSPC
PNCAQELAAFKSDHPDLVLRIYTSRLYFHWRRKYQEGLCCLWRSGIQVDVMDLPQFADCW
TNFVNSQSPFWPWNNLEKNSRCIQRRLQRIKESRGLQDLVNGLGNLQLGPPLS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccagcgcgaggggcccagaactgggatggaaccagcctgcctgggatgctgc
catcgcaaaccctattcaccgatcagaaacccgataaagatgttatatcaaagaacattc
tacttccactttaagaacctccgctatgccaaccttcgaaagaataccttcttgtgctac
gaagtgaataggatggagtgcaatgaacttgtccccctttgccaaggggtctttagaaaa
gagagcatcaacctccatgctgaagtgtgcttcctctactggttccacacccaagtgctg
ggggtgctgccccctgatgaaaagtacaagatcacctggtatgtgtcctggagcccctgc
aatgaatgtgcagagaaagtggccagcttcctggacacacaccgcaacctgagcctggcc
atcttcagctcccgcctctactatttttgggatccggactaccaggacaagcttcgcagg
ctgaatcaggcaggagcccagatagctgccatggacttcccagaattcgaaaagtgttgg
aacaagtttgtggacaatgatggcaagtcattcaggccttggaagagacttaaaataaat
tttagattccaggataacaagcttcgggatattctcagaaacccagtgagtctgctgaga
gaagacatattctccttgcagtttaacaataggcaccgggtcaagccagtccagcatcga
tactaccaaaggaagacctatctatgctacctgctggagcagcacaatggccagcagcca
ctcaaaggctgcctgcaaaacaagaaaggcaaacacgcagaaatcctcttcattgatgag
atgcgttcgttggaactcggccaagtgcaaatcacctgctacctcacctggagcccctgc
ccgaactgtgcccaggaactggctgcattcaaaagcgatcacccagacctggttctgcgc
atctacacctcccgtctgtacttccactggagaaggaagtaccaggaggggctgtgttgt
ctgtggcgatcagggatccaggtggacgtcatggacctcccgcaatttgctgactgctgg
acaaattttgtgaactcccaaagtccgttctggccgtggaataatctggagaaaaacagc
aggtgcatacaaagacggctccaaaggatcaaggagtcccggggtctgcaagatttggtg
aatggccttggaaatctacaacttggacccccattgtcctga
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