Clostridium gelidum: psyc5s11_19960
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Entry
psyc5s11_19960 CDS
T08447
Name
(GenBank) RND transporter
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cgel
Clostridium gelidum
Pathway
cgel01501
beta-Lactam resistance
cgel01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
psyc5s11_19960
01503 Cationic antimicrobial peptide (CAMP) resistance
psyc5s11_19960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgel03036
]
psyc5s11_19960
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgel02000
]
psyc5s11_19960
01504 Antimicrobial resistance genes [BR:
cgel01504
]
psyc5s11_19960
Chromosome and associated proteins [BR:
cgel03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
psyc5s11_19960
Transporters [BR:
cgel02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
psyc5s11_19960
Antimicrobial resistance genes [BR:
cgel01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
psyc5s11_19960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
HH_YBHG
Beta-barrel_RND_2
BSH_CzcB
BSH_RND
BSH_YknX
Biotin_lipoyl
BSH_CusB
Beta-barrel_YknX
RND-MFP_C
Beta-barrel_AprE
CzcB_C
CSD2
RnfC_N
HH_EMRA
Phage_lysis
HH_CzcB
GpP-like_1st
Phage_scaffold
Motif
Other DBs
NCBI-ProteinID:
BCZ45929
UniProt:
A0ABM7T2S3
LinkDB
All DBs
Position
2300213..2301463
Genome browser
AA seq
416 aa
AA seq
DB search
MKFKISKKKLIIVGIVLAVVVVGSISIFSKNNKVEVKLDVKNVKTQKVTTGTISTNIEYA
SNLKPAKEVIVLPKAGGKVATVNVNVGDKVSVGQTLFTLETTDYAAQLEQAQAGVSAASA
NLERTSDSGFTQQLLQAEQLVGKLQIQYNTVKDSYDRTQTLYSAEAVPKKELDDSKAQYD
AITIDLKNAEDNLNLLKSKSGPQATKAAEAAVEQAQAGVNSVQNQINNATITAPIAGVVS
EKAVEVGQLASGQSGSVTVIDYSNLTAEINIPDKMLAQIQVGQSVQVDINALPDKKIVGV
IDNISPNTSSKNNFYVVKVKIDNSNDDIKSGMFAKISLSAENKSNILMVPNETIKMENGV
NYLYTVDNGQVKKISIETGISNEKFTEITSSIEEGLDVITEGQNLLSDGEKVNLVE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttaagatttcaaagaaaaagcttattatagtggggatagttttagcagttgtt
gttgtgggtagtatttctatctttagtaaaaacaataaagtagaagtaaaactagatgtt
aaaaatgtaaaaacacaaaaagttacaacgggaacaatttcaacaaatatagaatatgca
agtaacctaaaacctgcaaaagaggtgatagttttaccaaaagcaggagggaaagttgca
actgtaaatgtaaatgttggagataaggttagtgtaggtcaaacattatttacattggag
acaacagattatgcagcacaactggagcaggcacaagcaggagtgagtgcagctagtgct
aacttagaaagaacaagcgactcgggattcactcagcaattattgcaagcagaacagtta
gtaggaaagttacaaattcaatataatactgtaaaagacagttatgacagaacacaaact
ttatattcagcagaagcagtacctaaaaaggagctagatgattcaaaagcacagtatgat
gctataactatagacttgaaaaatgctgaagataacttaaatctgctaaagagtaaatca
ggacctcaagctacaaaagctgcagaagctgcagtagaacaagctcaagcaggagttaat
tcggtgcaaaatcagataaataatgctaccattactgcgccaatagctggggttgtgtca
gaaaaagctgtagaagtaggacaacttgctagtgggcagtcaggttcagttactgttata
gattatagtaatttaacagcagaaataaatattcctgacaaaatgcttgcacagattcaa
gtggggcaatctgtacaagttgatataaatgcattaccagataaaaaaatagtcggggta
atagataatataagtccaaatacaagttctaaaaacaacttctatgttgtcaaagttaaa
attgataattctaatgatgatataaaatcaggtatgtttgcaaaaatatctttgtcagct
gaaaataaaagcaacattttgatggttccaaatgaaacaattaaaatggaaaatggtgtg
aattatctttatacagtggataatggccaggttaaaaaaatatctattgaaactggaatt
tcaaatgagaaatttacagaaataacaagcagtatagaagaaggtttggatgtcattaca
gaaggacaaaatttattaagtgatggagaaaaagtaaatttggtggagtaa
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