Corynebacterium guangdongense: CGUA_01120
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Entry
CGUA_01120 CDS
T09371
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cgf
Corynebacterium guangdongense
Pathway
cgf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cgf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CGUA_01120 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgf03400
]
CGUA_01120 (pdg)
Enzymes [BR:
cgf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CGUA_01120 (pdg)
DNA repair and recombination proteins [BR:
cgf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CGUA_01120 (pdg)
Prokaryotic type
CGUA_01120 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WJZ16825
LinkDB
All DBs
Position
221718..222536
Genome browser
AA seq
272 aa
AA seq
DB search
MSAPRESAGTTPRKRRRPGAHPAARGEETSLGRTRRARRINRTLAVAYPDAHAELDFSTP
LELLVATVLSAQTTDVRVNQVTPRLFAAYPTAAAYAQADREELQEIIRPTGFCRAKAGHL
IGLGEALVARYDGRVPQALADLVTLPGVGRKTAHVVRGNAFGKPGLTVDTHFQRLVARWG
LTEATDPVRIEHEIAGLIEKSEWTDFSQRVIWHGRRVCHARRPACGACLLAWDCPSYGRD
GSTDPEEAAARVTSPDRDHLLALAGLTPTTEA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccccgcgagaaagtgccggaaccacgccccggaagcgtcgccgacccggtgct
catccggcggcccggggagaggagacgtccctgggcaggacgcgccgggcccgccgtatc
aaccgcaccctcgcggtggcctacccggacgcccacgcggagctcgacttcagcaccccg
ctcgagctactggtcgcgacggtgctctccgcacagaccaccgacgtccgggtcaaccag
gtcacgccccggctcttcgccgcctaccccaccgccgccgcctacgcgcaggccgatcgc
gaggagctccaggagatcatccgaccgaccggtttctgcagggcgaaggcgggccatctc
atcggcctcggtgaggcgctcgtggcccgctacgacggccgggtgccgcaggcgctggcg
gacctggtcacgctgccgggcgtcgggcgcaagaccgcgcacgtcgtccgcggcaacgcc
ttcggtaagccggggctcacggtggacacgcattttcagcgcctggtggcgcggtggggg
ctgacggaggccaccgacccggtgcggattgaacacgaaatagccgggctcatcgagaaa
tccgagtggaccgacttctcccagcgggtgatctggcacggccgtcgcgtctgtcacgcc
cgcaggcccgcgtgcggcgcgtgcctgctggcctgggactgcccctcctacggccgcgac
ggcagcactgacccggaggaggcggctgcccgcgtcacctccccggaccgcgaccacctg
ctggcgttggccggcctgacccccaccaccgaggcgtag
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