Cryptococcus gattii: CGB_E6340C
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Entry
CGB_E6340C CDS
T02232
Name
(RefSeq) ATP-dependent transporter
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
cgi
Cryptococcus gattii
Pathway
cgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGB_E6340C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_E6340C
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CGB_E6340C
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_25
RsgA_GTPase
nSTAND3
Arf
PduV-EutP
AAA_28
NACHT
AAA_23
CLP1_P
ORC-CDC6-like
MMR_HSR1
AAA
AAA_27
AAA_15
SRP54
Motif
Other DBs
NCBI-GeneID:
10189703
NCBI-ProteinID:
XP_003194516
UniProt:
E6R661
LinkDB
All DBs
Position
E:complement(join(1229020..1229294,1229366..1229544,1229594..1229742,1229828..1229928,1229999..1230137))
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AA seq
280 aa
AA seq
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MPASGELAIDCQSLTYSWKEGDDPVLENVNLELQKGDRCLLLGANGAGKSTLLRILAGKR
LTKTRTCRILGQDVFMNPPGGVVYLGTEWSSNPVVRSDIVVSHFLDSVGGYRHKERRDRL
LRILDVDLDWHMHEISDGERRRVQLCMGLMGEWDVLLLDEVTVDLDVLVRADLINFLISE
SETRGATIVYATHIFDGLKKFPTKVCHIQLGSTPRELVAWPPAGKGSQEETLFELALGWL
REDRDLRRQKEKEKGRVRGPKTDVSVAPLRSRRLELTRKL
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccagcatcgggtgaactggccatcgactgtcaaagtctcacctattcgtggaaagaa
ggagacgatcccgtcctcgaaaatgtgaacctcgagcttcaaaagggggatagatgtctg
ctattgggtgctaacggagcggggaaatcgacacttttgagaattttagcaggcaagcgg
ttgaccaagacgaggacttgtcgaatcttgggacaggacgtattcatgaaccctccaggc
ggtgtcgtctatctcggaacagaatggtcctccaatcccgtcgttcgttcggacattgtt
gtttctcatttcctagactctgtgggtggctataggcacaaggagcggagagacaggctt
ttgaggattcttgacgtcgatcttgactggcacatgcacgaaatctctgatggagagcgt
cgtcgggtccagctttgtatgggacttatgggagaatgggatgtcttgcttttggacgaa
gtgactgttgatctggacgtgctcgttcgtgcggacttgatcaactttttgatctctgaa
tccgagactagaggagctactattgtctatgccacccacatctttgatggcctaaaaaaa
ttccctacaaaagtctgtcacatccagctcggctcaactcctcgtgaacttgtcgcttgg
cctcctgcgggcaaagggtcgcaagaggaaacacttttcgaattggcgttagggtggttg
agggaggatagagatttgagaaggcaaaaggaaaaggagaagggcagggtgagaggccca
aaaacggatgtgagtgttgcgcccttaagaagtcgtcgtttggagttgacaaggaagttg
tag
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