Carassius gibelio (silver crucian carp): 127933159 Help Entry 127933159         CDS       T08819                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism cgib  Carassius gibelio (silver crucian carp) Pathway cgib04115   p53 signaling pathway cgib04145   Phagosome cgib04148   Efferocytosis cgib04350   TGF-beta signaling pathway cgib04510   Focal adhesion cgib04512   ECM-receptor interaction cgib04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cgib00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     127933159   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     127933159  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     127933159    04148 Efferocytosis     127933159   09143 Cell growth and death    04115 p53 signaling pathway     127933159   09144 Cellular community - eukaryotes    04510 Focal adhesion     127933159   09142 Cell motility    04820 Cytoskeleton in muscle cells     127933159  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cgib04131]     127933159   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cgib00536]     127933159 Membrane trafficking [BR:cgib04131]  Endocytosis   Phagocytosis    Opsonins     127933159 Glycosaminoglycan binding proteins [BR:cgib00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    127933159 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS cEGF TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  127933159 NCBI-ProteinID:  XP_052385883 LinkDB All DBs Position A17:27100697..27108832 Genome browser AA seq 1164 aa AA seqDB search MTPRGLVLCLLFWSSVSSRRIEMPDDDTVFDLFELTHVDKKHHGVSLVKGPDPNSPAYKI LNPNLIPSVPELSFRDLVYSIQRERGFIFTANLKQAKRTRGSLVSVERTDGTGSVFEIIS NGKANTVDLVYWTESGQHVVSIEDVNVANGHWKNITVFVQEDRAQVHVGCEEINTQELDA PIQQILNQESADISSLRIAKGAAKTDRFLGVLQNVRFVFGTTLDAILRNKGCESSSFITD VMALKTPLIGSSPAIRTDYTGHKSKDLQDICSVSCDDLSSMFKELKGLGMVVKQLSNELR QVKAEREGDCLHNGIVHRDKDEWTVDSCTHCTCQNSATVCREISCPLMPCANATVPDGEC CPRCGTPNDAAVDTWSPWSEWTPCSVTCGRGIQQRGRSCDRINSNCDGTSVQTRECYMQE CDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCEGDGRQTEPCQKD PCPVNGGWGLWSPWDSCSITCGGGLQRRHRLCNSPAPKYGGKECMGDSKGTRLCNAQSCP VDGCLSNPCFAGTKCTSFPDGSWKCGECPVGYTGDGVHCQDIDECKEVPDACFVLNGVHQ CVNTEPGYNCLPCPPRYSGLQPFGRGTEQAIANKQVCTPRNPCEDGTHDCNKNANCIYLG IFSDIMHRCECKPGYAGNGYICGEDSDLDGWPNKNLHCVENATYHCKKDNCPDLPNSGQE DYDKDGIGDACDHDDDNDGIPDEGDNCPFVFNPGQYDHDHDQVGDSCDNCPYDSNPEQTD TDNNGEGDACAIDIDGDGILNEKDNCPYVYNTDQRDNDGDGVGDHCDNCPLEHNPDQIDS DSDNIGDKCDNNQDIDEDGHQNNLDNCPYIPNANQVDHDKDGKGDACDHDDDNDGVPDEK DNCRLAFNPDQLDSDGDGRGDVCKDDFDVDNVPDMYDVCPENFGISETDFRRFQMVPLDP TGTSQIDPNWVVRHQGKELLQTVNCDPGIAVGYDEFNAVDFSGTFFINTDRDDDYAGFVF GYQSSSRFYVVMWKQITQTYWSHTPTKAQGYSGLSVKVVNSTTGPGEHLRNALWHTGDTE GQVRTLWHDPKNIGWKDYTAYRWQLIHRPKTGHIRVIMYEGKKVLADSGSIYDKTYAGGR LGLFVFSQEMVYFSDLKYECRDSS NT seq 3495 nt NT seq  +upstreamnt  +downstreamnt atgactccgagaggactcgtgttgtgcctcttgttctggagttccgtgagcagcagacgc atagaaatgccggatgatgacaccgtgttcgacctgttcgagctcactcatgtcgacaag aagcatcacggggtgagcttagtgaagggacccgatccaaacagccccgcgtacaagatc ctgaacccgaacctgatcccctcggtgcccgagctctccttcagggacctggtgtactcc atccagcgcgagagaggcttcatcttcaccgccaacctgaagcaagccaagcgcaccagg ggcagcctggtctccgtggagaggaccgacggcaccggatccgtctttgagatcatctcc aacgggaaagccaacaccgtggatctggtgtactggaccgagagcggacagcacgtggtg tccatcgaggacgtgaacgtggcgaacggacactggaagaacatcacggtgtttgtgcag gaggatcgagctcaggttcacgtgggctgtgaggagatcaacactcaagagctcgatgct ccgatccagcagatcctgaatcaggagagcgcggacatctcgagcctgaggatcgccaaa ggagccgccaaaaccgatcgctttctgggagttctccagaacgtgcggtttgtttttgga acgacgctggacgcgattttacgcaataaaggatgcgagagctcatccttcatcactgac gtcatggccttgaaaacccccttgattggatccagcccggccatccgcactgattacacc ggacacaagtctaaagatctgcaggacatctgcagtgtctcttgcgacgatctgtccagc atgtttaaggagctcaagggactcggcatggtggtgaagcaattgtcaaacgagctccgc caagtgaaagcagaaagagaaggggattgtctgcacaatggcatcgttcacagagacaaa gacgagtggacggtggacagctgcacacactgcacatgtcagaactctgccactgtgtgc cgtgaaatctcctgtcctctcatgccctgtgccaacgctactgtccccgacggcgaatgc tgcccacgctgcggaacaccgaacgatgcggctgtagacacctggtcaccctggtctgaa tggacaccctgttcggtgacctgtggcagaggcattcagcagcgcggacgctcttgtgac cgaatcaatagcaactgcgacggcacatctgtccagacgagagagtgttacatgcaagaa tgcgacaaacgcttcaagcaggatggcggctggagccactggtccccctggtcttcttgc tcagtgacatgtggcgagggtgtcatcactcgaatccggttgtgcaactcccctacgcct cagatgggcgggagagactgcgagggagacggtcgtcagacagagccatgccagaaggac ccgtgccccgtaaatggaggctggggactctggtcaccatgggactcttgctccatcacg tgcggtggaggactgcagcgcagacaccgtttgtgtaacagccccgctcccaaatacggt ggaaaagaatgtatgggtgactccaaaggaacccgtttgtgcaacgcccagtcttgtcca gttgatggatgcctgtctaacccgtgcttcgccggcaccaaatgcaccagcttccccgat ggctcctggaagtgcggcgagtgtccggttggatacactggggatggagtccactgtcaa gatatcgacgagtgcaaagaagttcctgatgcctgttttgtgctgaatggagtccatcag tgtgtgaacacagaaccaggctacaactgcctgccctgccctccacgctactctggactg cagcccttcggcaggggaacagagcaggccattgccaacaaacaggtctgcacacctaga aacccatgcgaggacggcacccatgactgcaataagaatgccaactgcatctacctgggc atcttctctgacatcatgcaccgctgcgaatgtaaaccaggctacgctgggaatggttac atctgtggagaggactctgaccttgacggctggccaaacaagaacctccactgtgtggag aacgccacctaccactgcaagaaggacaactgtcctgaccttcccaactctggtcaagaa gactatgataaagatggaattggagatgcttgtgaccatgatgatgacaatgatgggatc cctgatgaaggggacaattgcccgttcgtctttaacccaggacagtacgaccatgaccac gatcaagttggcgacagttgtgataattgcccatatgacagtaatccagaacagaccgac accgacaacaacggcgagggtgatgcgtgtgccattgacatcgatggtgatggcatcctg aatgagaaggacaactgtccatatgtgtacaacactgaccagagagacaatgatggagac ggagtcggtgaccactgtgacaactgcccactggagcacaaccctgaccagatcgactct gactctgacaacattggagacaagtgtgacaacaaccaggacatcgatgaggatggacat cagaacaaccttgacaactgtccctacattcccaacgccaaccaggtcgaccacgacaag gacgggaaaggagacgcctgtgatcacgatgatgacaatgatggcgtgcctgatgaaaaa gacaactgccgactcgccttcaacccagatcaactggattcggacggagacggacgaggt gacgtttgcaaggacgactttgatgttgataacgtgccggatatgtacgacgtttgcccg gagaacttcggcatcagtgaaacagacttccgtaggttccaaatggttcctctcgatccc accggaacttcccaaatcgaccccaactgggtcgtgcgtcaccagggcaaagaacttctg cagacggtcaactgtgatcctggcatcgctgttggttatgatgagttcaatgctgtggac tttagcggcacgttcttcatcaacacagaccgtgacgacgactacgccggctttgtgttt ggctaccaatctagctcacgtttctacgtggtgatgtggaaacagatcacacagacctac tggtctcatacacccactaaagcacaggggtactctggactgtccgttaaagtagtgaac tcgaccacaggaccgggcgaacacctcaggaacgctttgtggcacactggagacaccgag ggacaggtgcgcaccctgtggcatgatcccaagaacattggctggaaggattacaccgcc tacagatggcaactaatccacagacccaaaaccggacacatcagagtcatcatgtatgaa ggcaagaaagtcttggctgattccggaagcatctatgataagacgtatgccggaggaaga cttggcctctttgtcttctctcaagagatggtttacttctcagacctcaaatacgaatgc agagattcatcataa

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