Carassius gibelio (silver crucian carp): 127938834
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Entry
127938834 CDS
T08819
Name
(RefSeq) dermatan-sulfate epimerase-like isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cgib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
127938834
Enzymes [BR:
cgib01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
127938834
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Gene cluster
GFIT
Motif
Pfam:
DUF4962
HSBP1
Hepar_II_III_C
Motif
Other DBs
NCBI-GeneID:
127938834
NCBI-ProteinID:
XP_052391692
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Position
A20:complement(2399696..2421406)
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AA seq
946 aa
AA seq
DB search
MRTYTRGSPTVFFISALVTLALAEVDPSGGIPFLRGNYKGTHPMLYFGQAEVEELQRVAV
GTHEALARQIREAGEAILERPEEYLPPWNPAEFSARWNEVYGNNLGLLSMFCLLYPHRAG
ALEVAKEYMERMAVQPDWMVKDAPWDEVPIAHSLVGFATAYDFLYEYLSKVQQERFLQVI
GNASRYMYEKSYHRGWGFQYLHNHQPTNCVALLTGSLVVMNQGYLQDAYLWTKQALAIME
KSMVLLRDVTDGSLYEGVAYGTYTTRSLFQYMYLVQRHFDIGHFNHPWLHKHFAFLYRTV
LPGFQRTVAIADSNYNWFYGPESQLVFLDRYVMRNGSGNWLAEIIRQNRVLEGPGQAGRG
QRWCTLHTEFLWYDASLQPTPPPDYGTSRLHYFEDWGVVTYGSALPAGRNRTFLSFKSGK
LGGRAIFDIVHKNKYKNWIKGWRNFNAGHEHPDQNSFTFSPNGVPFITEALYGPKYTFLN
NAVMFGPAVTESCFAPWEGQVTEACNSKWLKYKHGQAADCQGQVEAALEQQGMVFIRGEG
QGAYNPELKIKSFQRNLLLLHPQLLLMVDHIQLHLGSPTRSMSAFFHNTDMPFQITEVDG
VHGALIRHGNETSKMFWLDDTGSSEKAIVGYRSYPRGYPYNGSNYVNVTLPLRYPTNRVA
YIFFGCGVDVKSFSVHGDSETLDIYLATGDHTYTIYLYTDVIPTKPMAMVLMDQKKVMFE
RTAGTNVQPLVEVEGYVNVVEDNLQQVKPVFQQLERQILSRVLNSDSFHKTAERLLKSLD
KKKTPGTIEKMFSLSKKQGKGGKKASFSDSLPDIFAQLEVREKKERQRTMKRVYEEIPEE
ADGDSRAFINYSDFQKDRKVGFVKGRKFKEVRVGATAESDSMFNAASYIRLFLILNIATF
FVLLAVLLARFQRAQSLHTQRYFYCILLIDSFILLCLYSSCSQTKC
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttacacccgtgggtcaccaacagtgttctttataagtgcactagtgacccta
gctctggctgaagtggaccccagcggaggcattccattcctcagagggaactacaaggga
actcaccccatgttgtacttcggccaggcagaggttgaggagctgcagcgggtggcagtg
gggacacacgaggctttggcccgacagatccgcgaggccggtgaggccatactggagcgg
ccggaggagtatctgcccccttggaaccctgctgagtttagtgcccgctggaacgaagtc
tatgggaacaacttaggcctgctctctatgttctgcctgctgtacccgcaccgcgctggt
gcactggaagtagccaaggaatacatggagcgcatggctgtgcagcccgactggatggta
aaagacgctccgtgggatgaggttcccatagctcactctctggttggctttgctacagcc
tatgacttcctgtatgaatacctcagtaaagttcagcaggagcgtttcctgcaggtgatt
gggaatgcttcacgctacatgtatgagaagtcataccaccgcggctggggattccagtac
ctccacaaccaccaacccaccaactgtgttgctcttctgactggcagcctcgtggtcatg
aaccaaggatacctccaggatgcgtacctctggacaaaacaggctctggccatcatggaa
aagtccatggtgcttctccgagatgtgactgatgggtctctgtatgagggtgttgcgtat
ggaacttacaccactcgttcactctttcagtacatgtatctggtacagaggcactttgat
atcggccacttcaatcatccctggctccacaaacactttgcatttctctacaggacagtg
ttgcctggttttcagagaactgttgcgatcgcagattccaactataactggttttacggg
ccagagagtcagttggtctttctggatcgatatgtcatgcgaaatggcagtgggaattgg
ctggctgagataatcagacagaatcgagttctggagggcccaggacaggcaggcaggggg
cagcgctggtgcacactgcacacagagttcctctggtatgatgccagtctgcaacccact
ccacctcctgattatggtacatcacgcctccattatttcgaagactggggagtggtgacc
tacggaagtgctctacctgctgggagaaaccgcacatttctgtcctttaagtcggggaag
cttggtggacgtgctatatttgacatcgttcacaaaaacaaatacaaaaactggataaaa
gggtggcggaactttaatgcgggccatgagcacccggaccagaactcctttaccttctct
ccgaatggagtgccgtttatcacagaggcattgtacggtcccaaatacacctttctcaac
aatgccgtcatgttcgggcctgctgtgactgagagctgctttgcaccatgggaaggccaa
gttactgaggcttgtaactctaaatggcttaagtacaagcacggtcaagcagcagactgc
caaggtcaggtggaagcggctctggagcagcagggcatggtgtttattcgtggggagggt
caaggagcttacaaccctgagttgaagatcaagagttttcaaaggaacttacttctgctt
catcctcagttgctactgatggtagaccacattcagctgcatttaggcagcccaacacga
agcatgagcgccttcttccacaacacagacatgccgtttcagataaccgaagttgatgga
gttcatggtgctctgatcagacatggaaatgaaacatccaagatgttctggttggatgat
acaggcagcagtgaaaaggcaatagtgggatacaggagctatccccgtgggtacccctat
aatgggtcaaactatgtgaatgtgactttgccactgaggtaccctaccaacagagtggcc
tacatcttctttggatgcggagtggatgttaagagtttcagcgtgcatggagactcagaa
acactggacatctatctggcaaccggggatcacacctacaccatctatctgtacacagat
gtgattcccaccaagcctatggccatggtgttgatggaccaaaagaaagtaatgtttgaa
aggacagcagggacaaatgtgcagcccttggtggaagtagagggatatgttaatgttgtg
gaggacaatctgcagcaggtaaaaccagtcttccaacagctggagaggcaaatcctttca
cgggttcttaactcggacagtttccacaaaactgctgagcgcctcctaaagtccttggac
aagaagaagacaccagggactattgagaagatgttttccctttctaagaagcaggggaag
ggaggcaagaaggcaagcttttccgatagcctcccagacatctttgctcaattagaggtg
agggagaagaaggagaggcagaggacgatgaaacgtgtctatgaggagattccagaggag
gcagatggcgactcaagggcattcatcaattacagtgatttccaaaaggacagaaaagtg
ggatttgtaaaggggcggaaattcaaagaagtacgagtgggagctacagcagagagtgac
agtatgtttaatgccgcctcatacattcgccttttcctgattttaaatatagccactttc
tttgtgctgctggctgtactattggcgcgcttccaaagggcgcagagtttgcatacgcag
cgttacttctactgcatcctcctcatagacagcttcattctgctctgtctgtattcctcc
tgttcgcagacaaagtgctga
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