Carassius gibelio (silver crucian carp): 127942017
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Entry
127942017 CDS
T08819
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
127942017
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127942017
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127942017
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127942017
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
PKD_channel
Ank_5
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
127942017
NCBI-ProteinID:
XP_052393490
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All DBs
Position
A21:complement(17548220..17575995)
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AA seq
1022 aa
AA seq
DB search
MNPMAQLYYNKASDSPYRDRIPLQVVRAEVELSAKERAYLTAVEKGDYAGVKQALEEADI
YYNINVNCLDPLGRSSLLIAIENENLEVMELLLSHGVHMGDALLYAIRKEVVGAVELLLS
YKKPSGEKQVPSHMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKLFAKDLLDQARSSCELETILNHRDDHSEELDPRQCRDLAKLKLAIKYH
QKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPVFSLIYILAPKSTLG
TFIKKPFIKFICHTASYLTFLFLLLLTSQHIVQTDLHVQGPPPTIVEWMILPWVLGFIWA
EIKEMWDGGFTEYVHDWWNLMDFAMNSLYLATISLKIVAYFKYNSSRPRVEWEMWHPTLI
AEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQ
LYFYYETKASEEPNHCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFT
EFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTL
PPPFNIIPSPKSVWYLCVWLHCLLCGHGEPRHKECRHENLKEFTERHADNLIQNQHYQEV
IRNLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRKPPRRTYSSSSE
ATQQDETPESEEEEDGEGDRLRGPGYGDGKESSRSKASTSFSQCYRRNRESQFSVSALFK
SMSGPVRGRPESNGLRNNISHSAAFVRTSSRLQRFSCSKKNSLKRLEMLMSRMNGHIPDQ
QAETKGDQQSAYSISNSVPQTSWQGPQVLLKVTQSEMHLHTLGLGPPETEQNPMQATSQR
ANGRDSLLLQSPSHSLHSASSLTASSVQLLASSDYLCHDWVGPGDSLGSSSWEQEESVTT
KL
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgatggcgcagctatactacaacaaagccagtgactccccgtaccgcgatcgc
atcccgctgcaggtcgtgagggcggaggttgagctgtctgccaaggaacgagcctacctg
acggcggtggagaagggagactatgctggagttaaacaggcccttgaggaggctgacatc
tattacaacatcaacgtgaactgcctggacccgctgggccgcagctcactcctcatcgct
attgagaatgagaacttagaggtgatggagctactgttaagtcatggcgtgcacatgggt
gatgcactcctctatgccatccgcaaggaggtggtgggagcggtggagttactgttatcc
tacaagaagccaagtggcgagaaacaggttccttctcacatgatggacacgcagttttca
gagtttacacccgatatcacaccaatcatgttggctgcccacactaacaactacgagata
atcaagctcctagttcaacgtaaagtcaccatcccacggccacaccagatccgttgtgac
tgcgtagagtgtgtatcgagctccgaagtggacagccttcggcattcccgttcacgtcta
aacatctacaaaacacttgccagcccctctctcatcgccctttccagcgaagatcccatc
ctcacagcattcaggctgggctgggagctgaaggagctcagtaaggtggagaacgagttc
cggcaggagtacgaggagctgtcacagcagtgcaaactttttgctaaagacctgctggat
caggcccgtagctcctgtgagctggagaccatcctcaaccatcgggatgaccacagcgag
gagctggacccccgtcagtgcagagacctggccaagctcaagctagccatcaagtaccac
cagaaagagtttgtagctcagcccaactgccagcagcttctggcgactctgtggtacgat
gggttcccaggttggagacgacgtcactgggcagtgaagcttgtcacttgcttcatcatt
ggcctgctcttccctgtcttctcccttatatacattctggctccaaagagcaccctggga
accttcatcaagaaacctttcatcaagttcatctgccacactgcctcctacctgaccttc
ctcttcctcctcctcctcacctcacagcacatcgtgcaaactgacctgcatgtccaggga
cctccacccaccatcgtggagtggatgatcttaccctgggttctaggcttcatctgggcg
gagattaaagagatgtgggatggcggtttcacagagtacgtccatgactggtggaaccta
atggattttgcgatgaactccctctacctggccactatatctcttaaaattgtggcctac
tttaagtacaacagctctcgtcctcgtgtggagtgggagatgtggcaccctacgctcatc
gcagaggctctcttcgccatcgccaacatcttcagctcgctgcgtctcatctctctgttc
accgccaactctcacttgggcccactgcagatctctctcggccgcatgctgctggacatc
ctcaagttccttttcatctactgtctggtgctgctggccttcgctaacggcctcaaccag
ctctacttctactatgagacgaaggcgtccgaagagcccaaccactgcaaagggatccgt
tgtgagaaacagaacaatgccttctctacgctatttgaaaccctccagtctctcttctgg
tctgtgtttgggctgctgaatctgtatgttaccaatgtgaaggctcgtcatgagtttacc
gagtttgtgggggccaccatgttcggcacttataatgtcatctcactggtggtgctgctg
aatatgctcatcgctatgatgaacaactcttaccaactcattgctgatcacgccgacatt
gagtggaaatttgctcgtaccaagctgtggatgagctactttgatgagggggggacgtta
ccaccacccttcaacatcatacccagtccaaagtctgtgtggtacctgtgtgtgtggctg
cactgccttctgtgtggacacggagagcctaggcataaggagtgtagacacgaaaacctc
aaagagttcacggaaaggcatgccgataacctcattcagaaccagcactaccaggaggtg
atcagaaacttagtaaagcgatatgttgcagccatgatccgcagcgccaaaacagacgaa
gggctgacagaggagaacttcaaggaacttaagcaggacatctccagcttccgctatgag
gttcttgacctgctgggcaaccgtaaaccaccgcgccgcacatactcttctagtagcgag
gccactcagcaggacgaaacacctgagtctgaggaagaggaggacggggagggcgatagg
ctcagaggacctggatatggggatgggaaagagtcatctagatctaaagcatctacatcc
ttctcccaatgttacaggagaaacagagagtcccagttcagcgtatcagctctcttcaag
tccatgtcgggaccggtcagaggcagaccggaaagcaatggcttgagaaacaacatatcc
cactcggctgcatttgtgcggaccagcagccgcctgcagcgcttttcgtgttccaagaaa
aactctttgaaacgcttggaaatgctaatgtctcgaatgaacggacacatccctgaccaa
caggcagagaccaagggagatcaacagtctgcatacagcatctcaaacagcgtaccacaa
acgtcttggcaaggtccccaggtgttgttgaaggtaacacagagcgagatgcacctgcac
acactgggactgggaccaccagagactgaacagaacccaatgcaggccacatctcaacgg
gcaaacggcagggacagtctcctcctccagtcgcccagccactcgctgcactctgcttcc
agtctgaccgcctccagtgtccagctcctggcctccagtgattatctgtgccacgactgg
gtcggacccggtgacagtttgggctcctcaagctgggaacaagaggagtcggttacgaca
aagctgtag
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