Carassius gibelio (silver crucian carp): 127942168
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Entry
127942168 CDS
T08819
Name
(RefSeq) rap guanine nucleotide exchange factor 6-like isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04517
IgSF CAM signaling
cgib04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127942168
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127942168
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Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
RA
PDZ_6
cNMP_binding
RA_2
PDZ_2
ABhydrolase-like_N
DOT1
Motif
Other DBs
NCBI-GeneID:
127942168
NCBI-ProteinID:
XP_052393744
LinkDB
All DBs
Position
A21:20176789..20248347
Genome browser
AA seq
1586 aa
AA seq
DB search
MKLLFPDIRDFNMNSSVDLSLKKALKTPPTRRTAEDLNTIYSHLYHMDVLCHLREHQLRS
MCMTARYERYEANHVLFYANSISTCWFVLLSGSVLVKEHMYLARCCFGTQRGGRRGCECI
TLEPSEMIVVQNASESDDAALQGNSRRRVHKVNAGGERQLIVDAHDASATLPGDLSKMHL
TDHPHQQMHMPPSQSGCSIASDSGSSSLSDIYQATESELGDVDLSGLPEAPVDSEEEEED
EDIERSSEALLGRDLVRECLEKDAVDRTDDDIEQLLEFMHQLPAFANMTMSVRRELCRVM
MFEVVEQEGTIILQDKQELDLWYVILNGAVEISYGDGRTEILCMGNSFGISPSLDRQFMN
GVVCTKGDDCQFVCIAQEDYCRILNHVEQNTHKEEEEGEIVMVKEHRELDRSGTRKGHIV
IKGTPERLIMHLVEEPSVVDPTYIEDFLLTYRTFLSSPMEVGKKLLEWFKVDSLRDTVTR
IVLLWVNNHFNDFEGDPVMTQFLEDFEKLLDSSKMKGHLRLLNIACAAKAKCRQITLQKP
SRESPLFFTLQGGSERGFGIFVETVEEASKAAEAGLKRGDQILEINGQNFENISYSKAMD
FLKNNTHLSLTVKTNIFVFKELQSRVRNEKKNGGPHIPKIQERRINRFSIPDLPGDLEFP
SDRKSRKKMKANTVSGGRNKIRKMLEKTRFSILPPKPFSDGGMSQSQDDSIVGTKQCRHS
VAIMPIPGSLSSSSPDLLHPAASALDFTNPSVAGFYYIPDQVIRVFKADQQSCYIIISKD
TTAKDVVSHVVSEFSLIAAPETYSLCEVSISPEGVIKQRRLPEQLSKLADRIQLNGRYYL
KNNMETETLCSDEDAQELLRESQIGLLQLSTVEVAAQLSMRDFGLFRNIESTEYVDDLFK
LDPGGGGSSNHLKQFEEVINQETFWVASEILREPNALKRMKTIKHFIKIALHCRECKNFN
SMFAIISGLNLAPVARLRSTWEKLPSKYEKLFRDLQDIFDPSRNMAKYRNILSSQSVQPP
IIPLFPVVKKDLTFLHEGNDSSVDGLVNFEKLRMIGKEIRNVVRMTSANMDPALMFRQRK
KRWKSLGSLSQGSTNSNLLDVQGSHKKRVRRSSLLNAKKLYEDAQMARKVKQYLAHLEVE
TDEEKFQIMSLQCEAAYSTLSKNLSERRSAKSDMSPVSMRSSGVSSAKPQNRVSQVLQVP
PVSLYPLRKKSIAKDLSASFSPHSAQVLKKAADDISIKRADDTATVSSLSSSPTVSPQGS
PRKVGGAPRQNCAQPNLSGSSSSLASEVGVRTAGGRSGGIGPSPLSLTGYSLMPSGRSDL
SDSSEISSRSSIVSNGSVDSMPPAPSISVRSETPTHTPAHCSQPGTSSSSAQHLAVRESS
LMLSSSAEELTVPEQTSVSELADSGRGSWTSCSSNSHDNLQTLPGQRALDLLSHRHTPLC
APIAEGTAEDSCSRDGSELRQSWTSSSSLSDTYEGSYSTVKRKTQDQQSTEASYKTVTSS
TEKGLIVYCVTSPCKDDRFKAPPPTPPGYQGLTLGDVQDGGGLRPAHVKPPEYSVALQRC
KLRHSLASVTLRSHADSEEDEQVSAV
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgaagttattattcccggatatcagagattttaatatgaattcctcagtggatttatcg
ctgaagaaagcgctgaaaactcctccgacacgacgaactgctgaggacttgaacaccatc
tactctcatctgtaccacatggatgtgctgtgtcacctcagagaacatcagctcaggtcc
atgtgcatgacggcccggtacgagcgctatgaggccaaccacgtcctcttctatgctaac
agcatctccacctgctggttcgtcctgctctcgggctcagtgctggtcaaggagcacatg
tatctggcacggtgctgtttcgggacgcagcgtggaggaagacgaggctgtgaatgcatc
actttagagccgtccgagatgatcgtggtgcagaacgccagcgagagcgacgacgcggct
ctacagggaaactctcgccgccgcgtccataaggtgaacgccggaggagagcggcagctg
atcgtagacgcccatgatgcctcggccacgcttcctggtgacctcagcaagatgcacctg
acagaccacccccaccagcagatgcacatgcctcccagccaatcaggatgcagcatcgcc
agtgactcggggagcagcagcctatcagacatctaccaggccacggagagcgagctggga
gacgtggatctgtccggcctccctgaagctcccgtggactctgaggaagaggaggaggat
gaagatatcgagcgctcttccgaggctcttctgggcagagatctggtgcgagagtgtctg
gagaaggatgcggtggatcggaccgatgacgacatcgagcagctcctggagttcatgcat
cagctgccggcgtttgctaacatgaccatgtctgtcaggagagagctgtgtcgggtcatg
atgttcgaggtggttgaacaggaaggcaccatcattcttcaggacaagcaggagctggac
ctgtggtacgtgatcctgaatggtgctgtagagatcagctatggagacggccgaacagag
atcctgtgcatgggcaacagctttggaatctcaccgtctttagacagacagttcatgaac
ggggttgtgtgcactaaaggagatgactgccagtttgtgtgcatcgcacaagaggactac
tgccgcatcctcaaccatgtggagcagaacacacacaaggaggaggaggagggcgagatc
gtcatggtcaaggagcaccgagagctggaccgcagcggcaccaggaagggccacatcgtc
attaagggcactcctgagcgtctgatcatgcatctggtggaggagccatcagtggtggat
cccacttacattgaggacttcctcctgacgtaccgcaccttcctgtccagccccatggaa
gtgggcaagaaacttttggaatggttcaaagtggacagtctcagagacacggtgacgaga
atcgtgttgttgtgggtaaacaatcattttaacgactttgaaggcgatccggtaatgact
cagttcctggaggactttgagaagttactggactcctcgaaaatgaagggtcatctgcgt
ctgctgaacattgcgtgcgctgctaaagccaagtgtcgtcagatcaccctgcagaagccg
tccagagagtctccgctgtttttcacccttcagggcggcagtgagcgcggcttcggcatc
ttcgtggagactgtggaggaggccagtaaagcggcagaagcagggctcaagcgtggagat
cagatcttggagatcaatgggcagaactttgagaacatctcgtactccaaagccatggat
ttcctgaagaacaacacgcacctctctctgactgtgaagacaaacatcttcgttttcaaa
gagcttcagagccgcgtgaggaacgagaagaagaacggcggtcctcacatccctaagatt
caggagcggaggatcaaccgcttctccatccctgatctacctggtgacttggagtttccc
tcggacagaaagagccgcaagaagatgaaggccaacacggtgtctggaggacgcaacaag
atccgtaagatgctggagaagaccagattcagcatcctgcccccgaaacccttcagcgac
ggtggcatgtctcagtctcaggacgacagtatcgtgggcactaagcagtgcaggcacagc
gtggccataatgcccatcccgggcagtctgtcgtccagcagtcctgacctgctgcatccc
gccgccagcgctctggacttcaccaacccttcagtggctggtttctactacattcccgat
caggtgatccgcgtgttcaaggccgaccagcagagctgctatatcatcatcagtaaagac
accacagctaaagatgtcgtctcgcatgtggtcagtgagttcagcctcatcgccgctcca
gagacatactcgctgtgtgaggtttccatcagtcctgaaggagtcatcaaacagcgccgc
ctgcccgagcagctctcaaaactagcggaccgcatccagctcaacggcaggtactacctg
aagaacaacatggagacagagacgctctgctctgatgaagacgctcaggagctcctgagg
gagagtcagatcgggctcctgcagctcagtactgtggaggtggcagcgcagctctccatg
agagacttcggcttgtttcgtaacatcgagtccaccgagtatgtggacgacttgtttaag
ctggaccccggcggtggaggcagcagcaaccatctgaagcagttcgaggaggtcatcaac
caggagaccttctgggtggcctctgagatcctgcgcgagcccaacgcgctcaaacgcatg
aagaccatcaagcactttatcaagatcgccctgcactgccgtgagtgcaagaacttcaac
tccatgtttgccatcattagtggtcttaatctggctccagtagctcgcctgagaagcacg
tgggagaaactacccagcaagtatgagaaactgttccgtgatctccaggacatcttcgac
ccatcacgaaacatggccaaataccgcaacatcctgagcagccagagcgtacagcctccc
atcatcccgctgtttcctgtggtcaagaaagacctcaccttcctgcacgaaggtaacgat
tccagtgttgacggcctggtgaatttcgaaaagttacgaatgatcggcaaggagatacga
aatgtggtgcgcatgacgtcagccaacatggacccagcgctcatgttcagacagaggaag
aagaggtggaagagtttagggtctctgagtcagggcagcactaactcaaacctgctggac
gttcagggcagtcacaagaagcgtgtgcgccgcagctctctgctcaacgccaagaagctg
tacgaggacgcccagatggcacgtaaggtgaagcagtacctggctcacctagaggtggag
acggacgaggagaagttccagatcatgtctctgcagtgtgaagcggcctacagcacactg
tctaagaacctgagcgagcggcggtcagctaaatcagacatgtccccagtgtccatgcgc
tcctccggtgtgtcttcagccaagcctcagaaccgcgtctctcaggtgctgcaggttcct
cccgtcagcctttaccctctgcgcaagaagagcatcgccaaagacctgtccgcttccttc
agtccacactcagctcaggtgctgaagaaagcagccgatgacatcagcatcaagagagca
gacgacacagccaccgtctcgtccctgagctccagtcctaccgtctctccacagggatct
cctcgcaaagttggcggagctcccagacagaactgcgctcagccgaacctgtcgggttcg
tcctcgtctctggccagcgaggtcggcgtcaggacggcaggaggacgctcgggtggcata
ggtccgtctcctctctctctcacaggttattccctcatgccctccggcaggtctgacctg
tccgactccagcgagatctcctcgcgctccagcatcgtcagtaacggctcggtggactcc
atgcccccagcgccctccatcagcgtccggtcagagacgcccacacacactccagcccac
tgcagtcagcccggcacgagttcatcttccgctcaacatcttgccgtgagggagagcagc
ttgatgttgtccagcagcgcggaggagctgacggtgcccgagcaaacctccgtctctgag
ctggccgacagcggccgcgggagctggacctcctgctccagtaactctcacgacaacctc
cagactcttccaggccagcgagctctggacctgctcagccatcgccacacgcccctgtgc
gcccccatcgcagaggggacagcggaggacagctgctccagagacggatctgagctcaga
cagagctggacgtcctccagttccctgtcggacacctacgagggcagctacagcaccgtc
aaacgcaagacgcaagatcagcaaagcacagaggcttcgtacaagaccgtcacgtccagc
acggagaagggactcatagtgtattgtgtaacgtcaccctgcaaagacgataggttcaaa
gcgccgcccccgactccgccggggtaccagggcctgacgctgggcgacgtgcaggacgga
ggaggcttgcggccggcccacgtaaagccgcccgagtatagcgtggccttgcagaggtgc
aagctgcgccacagcctcgccagtgttactctccgttctcacgccgatagtgaggaggat
gagcaggtttctgccgtgtga
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integrated database retrieval system
