Carassius gibelio (silver crucian carp): 127942589
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Entry
127942589 CDS
T08819
Name
(RefSeq) platelet-derived growth factor subunit A-like isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04020
Calcium signaling pathway
cgib04510
Focal adhesion
cgib04540
Gap junction
cgib04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127942589
04020 Calcium signaling pathway
127942589
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127942589
04540 Gap junction
127942589
09142 Cell motility
04810 Regulation of actin cytoskeleton
127942589
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgib04052
]
127942589
00536 Glycosaminoglycan binding proteins [BR:
cgib00536
]
127942589
Cytokines and neuropeptides [BR:
cgib04052
]
Cytokines
Growth factors (RTK binding)
127942589
Glycosaminoglycan binding proteins [BR:
cgib00536
]
Heparan sulfate / Heparin
Growth factors/receptors
127942589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
KH_PARP14_8
Motif
Other DBs
NCBI-GeneID:
127942589
NCBI-ProteinID:
XP_052394371
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All DBs
Position
A22:complement(13118293..13125723)
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AA seq
194 aa
AA seq
DB search
MRPELIHFLFCCFSLLSAAAEEAPIPQELIERLSNSEIRSISDLQRILEIDFVENEVLED
VKQGHYKEQLYDSRHLKNSHSRRKRSIEEAVPAVCKTRTVIYEIPRSQVDPTAANFLIWP
PCVEVRRCSGCCNTSNMRCHPSKKHHRTVKVAKVEYVRRRPKLREVQVQLEDHLECVCTS
KHHSESRIHTADIR
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgagacccgagctgatccactttctcttctgctgcttctccctgctttcagcagccgct
gaggaagccccaattccacaagagctgattgagagactgtctaacagcgagatccgcagc
atcagcgacctccagaggatcctggagattgacttcgtagagaatgaggtgctggaggac
gttaaacaaggccactataaggagcaattgtatgatagcagacacctcaagaactcacac
tccagacgcaagagaagcattgaggaggcagtgcccgccgtctgtaagactcgcactgtg
atctacgagatcccacgcagtcaggtcgatcccacggccgccaacttcctgatctggcct
ccgtgtgtggaggtgagacgatgctcaggctgctgcaacaccagcaacatgcgctgccac
ccatccaaaaagcaccacaggaccgtcaaggtggccaaggtggagtacgtacgcaggagg
ccgaagctccgggaggtgcaggtgcagctggaggatcatctcgagtgcgtctgcacgtcc
aaacatcactcagagtcccgcatacacacggcagatataaggtga
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