KEGG   Carassius gibelio (silver crucian carp): 127945830
Entry
127945830         CDS       T08819                                 
Name
(RefSeq) RING-box protein 1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03420  Nucleotide excision repair
cgib04110  Cell cycle
cgib04114  Oocyte meiosis
cgib04120  Ubiquitin mediated proteolysis
cgib04141  Protein processing in endoplasmic reticulum
cgib04310  Wnt signaling pathway
cgib04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127945830
   04120 Ubiquitin mediated proteolysis
    127945830
  09124 Replication and repair
   03420 Nucleotide excision repair
    127945830
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    127945830
   04350 TGF-beta signaling pathway
    127945830
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    127945830
   04114 Oocyte meiosis
    127945830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cgib04121]
    127945830
   03400 DNA repair and recombination proteins [BR:cgib03400]
    127945830
Enzymes [BR:cgib01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     127945830
Ubiquitin system [BR:cgib04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   127945830
  Multi subunit type E3
   SCF complex
    Ring finger protein
     127945830
   Cul2 complex
     127945830
   Cul3 complex
     127945830
   Cul4 complex
     127945830
   Cul7 complex
     127945830
   Cul8 complex
     127945830
   Cul9 complex
     127945830
DNA repair and recombination proteins [BR:cgib03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      127945830
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      127945830
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 127945830
NCBI-ProteinID: XP_052397876
LinkDB
Position
A3:complement(9709457..9711125)
AA seq 108 aa
MAAAMDVDTPGGANSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggccgcaatggacgtagacacccctggtggagctaacagtggagccagtaaaaag
cgttttgaagtgaaaaagtggaacgctgtggctctgtgggcttgggacattgtggtggac
aactgtgccatttgtagaaatcacattatggacctctgtatagagtgtcaggctaatcag
gcgtcagctacatcagaggagtgcacagtggcctggggagtctgtaatcatgcgtttcat
ttccactgcatctctcgctggctgaagaccagacaggtgtgtcctctggacaacagagag
tgggagttccagaagtacggccattag

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