Carassius gibelio (silver crucian carp): 127945885
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Entry
127945885 CDS
T08819
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A-like
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127945885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cgib04050
]
127945885
04090 CD molecules [BR:
cgib04090
]
127945885
Cytokine receptors [BR:
cgib04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
127945885
CD molecules [BR:
cgib04090
]
Proteins
127945885
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
RANK_CRD_2
KIAA1549
ODV-E18
Epiglycanin_C
ECSCR
Motif
Other DBs
NCBI-GeneID:
127945885
NCBI-ProteinID:
XP_052397942
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Position
A24:10442048..10455045
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AA seq
581 aa
AA seq
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MRVDFSASWIFQGWITHLVLALCTQAGLAIICQQNEYEHNGGCCGKCEPGKYVFAHCDGS
SSTKCRVCGLEEYQPHWNSDTKCIPQKFCDEGKGFNRTRLHNPTADEPCQCKQGFHCSLI
NCEYCEAIQKCPAGEGIVMGETGRASCVPCQYGYFSDSISIEACKKWTDCKAIGKTEKQP
GSSKTDVVCGVHSPGMTPWVLVAILAVIIVVSLVVLFLFCCKDKLNFLSVNLRTCVQNLK
GSRNQQETGTSYHCGNGPQTLPLICQELTPPEPLITHPSAQLTILDETSTSTDREQDQDR
AETSSGSSSEDSGVGSVSPLSGSSCSCALPLKEPMEVGENEDCSQLVATGLATCCSCRTE
DAIGENRQTVDLKEPLLCESCSSDVLPACDHVGLQRSQELCLDYSSPAGKEAMSEMRGIY
GERGPVEELYRQNEPCCCSIDSTTVPPLSSVSSNEQGLSLIHSGDHKLSDPDADFQNQCS
ESTLTSGQVTGNNNTTFISSGQVMNFSGEVIVVYVSQTSLGSSEGADEPFSCPVQEQSND
DSFQSEPKSNITTTPQAKSRNGHLEKHLPVQEMTNDCSWQK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagagtggatttttctgctagttggatatttcaaggatggatcacacacttggttctt
gctctgtgcacgcaggcaggactggccattatctgccaacaaaatgaatatgagcacaac
gggggatgctgcggaaaatgtgaaccagggaaatacgtttttgcccattgcgacggcagc
tcgagcacaaagtgccgcgtttgtggccttgaagaataccagccgcactggaacagtgac
actaaatgtattcctcagaagttctgcgacgagggtaaaggatttaaccgcactcgttta
cacaaccctacagcggatgaaccttgtcagtgcaagcagggtttccactgctctctgatc
aactgcgaatactgtgaggccattcaaaaatgtcctgcaggagaaggaatcgtaatgggg
gagacgggcagagcttcctgtgtaccttgtcaatatggatatttctcagattccatatca
atagaagcctgcaagaaatggacagattgtaaagctatcggcaagaccgagaaacagcca
ggaagctctaagacagatgtggtgtgtggagtccattctcctggcatgacaccctgggtg
ctggtggccatcctcgcggtcatcattgtggtgtccctggttgttctcttcttgttttgc
tgcaaggataagctgaacttcctctcagtaaatctacgcacttgcgtccaaaacctgaaa
ggaagtaggaaccaacaggaaactgggacttcataccactgtggcaacggtccacaaacc
ctccctctgatttgccaagaactaactcccccagagcccctgatcacacatcccagcgcc
caattaaccattcttgatgaaacctcgacttccacggaccgcgagcaggaccaggaccga
gccgaaacctcatcgggcagctccagcgaagactccggagttggatctgtgtctcctctg
tcaggcagctcctgcagctgtgcgcttcccttgaaggagcccatggaggtcggagagaac
gaggactgcagtcagctggtggccacgggtttggcgacatgctgctcctgcaggacagaa
gacgccattggagaaaaccggcagaccgtcgacctgaaagaacctctgctgtgtgagagc
tgctcgtcagacgtcctgccagcctgcgatcacgtgggtctgcagcgctcccaggaactc
tgtctggactatagcagccctgctggcaaagaagccatgtcagagatgagaggcatctat
ggggagcgaggtccggttgaagagctgtatagacagaacgaaccttgttgctgcagcata
gactccaccaccgtcccacctctgtcatcggtcagctctaatgaacagggcctttcactg
atccacagcggtgaccacaaactgtccgaccccgatgcagacttccagaaccagtgctca
gaatccactctcacatctggtcaggtgacaggaaacaacaacactacttttatctccagc
gggcaggtgatgaacttcagcggtgaggtcatcgtggtgtacgtcagtcaaacgtccctg
gggagcagcgaaggagcagacgaacccttcagctgcccggttcaggaacaatccaacgat
gacagttttcaaagtgagcccaaatctaacataaccacaacaccgcaggccaagagccgg
aacggacacctggaaaaacacctgcccgtgcaggaaatgaccaacgactgctcctggcag
aaataa
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