Carassius gibelio (silver crucian carp): 127946795
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Entry
127946795 CDS
T08819
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127946795
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
127946795
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Lustrin_cystein
HsdM_N
Motif
Other DBs
NCBI-GeneID:
127946795
NCBI-ProteinID:
XP_052399523
LinkDB
All DBs
Position
A3:complement(11476541..11521974)
Genome browser
AA seq
1648 aa
AA seq
DB search
MFIMITILSNCVFMTMGDPPAWNKIVEYVFTGIYTFEALVKVLSRGFCIGDFTFLRDPWN
WLDFMVISMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADVM
ILTVFCLSVFALIGLQLFMGNLRQKCIKSFDWSNSDNLTVLFNHTEFNGTETANSTFNFQ
EYIENPENYYYVPGHMDPLICGNSSDAGKCPEGYTCLKAGPNPNYGYTSYDSFAWAFLAL
FRLMTQDFWENLFQLTLRAAGKTYMIFFVIIIFLGSFYLINLILAVVAMAYAEQNEATHA
EAKEKEEEYAKILEQLKKQAEQQKNNMVNGSKTSLSSRKKGDDDQIQNDFDGIALKPLSK
SNGSKGSMNYLEVPNTQMRKSSAASAADDALDELEDIQRPCPPCWYKFADIFLKWDCCLP
WVKLKKFIYLIVTDPFVDLGITICIVLNTVFMAMEHYPMTQHFEHMLTVGNLVFTGIFTA
EMVLKLIALDPYYYFQVGWNIFDSIIVTMSLVELGLANVEGLSVLRSFRLMRVFKLAKSW
PTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRDCVCKISEDCELPRWH
MTDFFHSFLIIFRILCGEWIETMWDCMEVAGQGMCIVVFMMVMVIGNLVVLNLFLALLLS
SFSGDNLAASDDDGEMNNLQIAVARMTRGIDWVKAFVIGHFTQFLGLKPKEEGVKANEEI
DSKVATMNSSLSVIKVPIANGESDDDDDGNSSSEDEDKEDIDKNSKKTDGDESSTCSTVD
RLPDVVEVEEEEEEDSTVPEDCYTENCIRRCPCLELDVTQSKRKAWWNFRKTCFSIVEHN
YFETFIIFMILLSSGALAFEDIYIEQRRVIKIILEYADQVFTYVFVIEMLLKWVAYGFKV
YFTNAWCWLDFLIVDVSLISLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMKVVVN
ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCFNSTSEEVFPITQVNNKSECFM
LKEADPNVRWMNMKVTFDNVGMGYLSLLQVATFKGWMDIMYSAVDSREVEMQPDYESNLY
MYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKLGGTDIFMTEEQKKYYNAMKKLGSKK
PQKPIPRPTNCFQGLAFDLVTKQFFDIFIMVMICLNMVTMMVETDDQSEEKEYILFLINL
VFIILFTGECILKITALRYHYFSIGWNIFDFVVVILSIAGLLLADLIEKYFVSPTLFRVI
RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKE
AGIDDMFNFETFGNSIICLFMITTSAGWDGLLAPILNSPPDCDPDVENPGSPVRGNCGNA
AVGIVFFCSYIVMSFLVVVNMYIAIILENFNVATEESSDPLCEDDFEMFYETWEKFDPTA
SQFIAYSSLSEFCDTLKDPLRIPKPNTLTLITMDLPMVPGDKIHCLDILLALTTHVLGDS
GQMDAMKATMEEKFMANNPSKVSYEPITSTLRRKQEEVAASTIQSAYRKHVLKRGLKQAS
YMYREKTNSKRHGEEAPEKVGMISEKMSHLYGDQAIEDNKPTSFSFSQRGKPLYGVTVRV
QRDVVLHSAPFPAPDSSATAEKLRESIV
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcatgataaccatcttgtcaaactgcgtgttcatgacgatgggtgaccctcca
gcatggaataaaatagtagagtacgtttttactggcatctacacctttgaggcgcttgta
aaggtgctgtccagaggcttctgcattggtgatttcacattcctgagagatccgtggaat
tggctggattttatggtcatctccatggcgtacgtcacagagtttgtggacttggggaat
atatctgccctgaggactttccgtgttcttcgggccctaaaaacaattactgtaatccca
ggtcttaaaaccattgttggtgccttgattcagtcggtgaagaaattggcggatgtcatg
atcctcactgtcttctgtctcagcgtgtttgctctcattggtctacaactgtttatggga
aatttgcggcaaaagtgcatcaagtcttttgactggagcaacagtgataacctgaccgtg
ctcttcaatcacactgagtttaatggcactgaaacggccaacagcacattcaactttcag
gaatatattgaaaatccagaaaactactactatgtgcctgggcatatggatccgttaatt
tgtggtaacagctctgatgcagggaagtgccctgaggggtacacatgcctgaaagctggc
ccaaacccaaattatggctacactagttatgacagttttgcatgggctttcttagccctt
ttccggctaatgactcaagatttctgggagaacttgttccagttgacactccgtgcagca
gggaagacgtacatgatcttctttgtaatcatcatcttcttgggttcgttctacctcatc
aatctgattctggctgtggtggccatggcgtatgctgaacagaatgaagccacccatgca
gaagcaaaagagaaggaggaagaatatgcaaaaatcctggaacagctcaagaaacaagct
gagcagcaaaagaacaacatggtcaatggcagtaagacatcattatctagcagaaagaaa
ggtgatgatgaccaaattcagaacgactttgatgggatcgcattgaaacctctctcaaag
tcaaatggatccaaaggcagcatgaattacttagaagtccctaacacgcagatgagaaaa
tcaagtgcagcgagcgctgcagacgatgctttagatgagctggaggatattcaaaggccg
tgccctccctgctggtacaagtttgctgacatattcctgaaatgggattgctgcttgcca
tgggtgaaattaaagaagtttatctacctaattgtaacggacccttttgtggatctgggc
atcaccatctgcattgtgctcaacactgtgttcatggctatggagcactatcctatgact
caacatttcgaacacatgttgacagtggggaacctggttttcactggtatctttacagca
gagatggtgctgaaacttattgcactggacccatattattacttccaagttggctggaac
atttttgacagcataattgtgaccatgagtctggtggagttgggcttagccaatgttgag
ggcttatctgtgctgaggtccttccgtctgatgcgtgtgttcaagctggcaaaatcttgg
ccaacactaaacatgctgataaaaatcattggtaattctgtgggtgctcttgggaacctg
acccttgtcctggccattattgtcttcatctttgctgtggtggggatgcagcttttcgga
aaaagctacagggactgtgtgtgtaagatctcagaggattgcgagctccctcgttggcac
atgacagatttctttcactcgtttctcatcatctttcgcattctgtgtggggaatggatc
gaaacaatgtgggactgcatggaagtggctggccaaggcatgtgcatcgtcgtcttcatg
atggtcatggtgataggaaacctagtggtgttgaatctcttcctggctctgctgctcagc
tccttcagtggagacaacctggcagcgtctgatgatgatggggagatgaacaatctgcag
attgccgttgctagaatgacaagaggcattgactgggtaaaggccttcgttatcggacat
ttcacacagtttctgggactgaagccaaaggaagagggtgtgaaagcaaacgaagaaatc
gattctaaagtggccaccatgaattccagcctgtccgttatcaaagtgcctatagccaac
ggtgaatcggatgatgacgatgatggcaacagttcttctgaggatgaagacaaagaagat
atcgataaaaatagtaaaaagacagatggagatgaatcatcaacctgcagcacagtggac
agacttcctgatgtagtagaggtggaagaagaggaagaagaggactccaccgtccctgag
gactgctacacagagaactgcatcaggcgatgtccttgcttggagctggatgttacccaa
agtaaaaggaaggcatggtggaatttccgtaaaacctgcttctccattgtggagcacaac
tattttgaaaccttcatcatcttcatgatcctcctcagcagtggagctttagcatttgag
gacatatacattgaacaacgaagagtgattaaaatcattcttgaatatgcagatcaggtc
ttcacctatgtttttgtcattgagatgcttctgaaatgggtagcctatggcttcaaggtc
tatttcacaaatgcatggtgttggctggactttctcattgttgatgtgtccctaatcagt
ttgactgcaaatatcttaggctactctgaactgggggccataaagtctctcaggactttg
agagcactgagacctcttcgagctctctccaggtttgaaggaatgaaggtggtggtgaac
gcgctggtgggggccatcccatccatcttcaacgttctcttggtctgcctgatcttttgg
ctcatcttcagcatcatgggagtcaacctttttgctggaaagttctactactgcttcaac
tcaacgtccgaagaagttttccccatcactcaggtcaacaataagagtgagtgcttcatg
ctcaaagaggctgatccaaatgtgcgatggatgaatatgaaggttacctttgataacgta
ggcatgggatacctctccttactgcaagtggcaacattcaaaggatggatggacatcatg
tatagtgctgtggattctcgtgaagttgaaatgcagccggactatgagtcaaacctctac
atgtacatttactttgtcatcttcatcatttttggctctttcttcactcttaatctattt
attggtgtcatcattgacaatttcaaccaacaaaaggcaaagttaggaggaactgatatc
ttcatgacagaagagcagaaaaaatactacaatgccatgaagaaacttggctccaaaaag
ccacagaaaccaattccaaggcccacgaactgcttccaaggtttggcatttgacctggtc
accaagcagttctttgacatcttcattatggtgatgatctgcctgaacatggtgaccatg
atggtggagacggatgaccagagtgaagagaaggaatatatcctgttccttatcaacttg
gtcttcatcatactcttcaccggggagtgcattctcaagatcaccgccttgcgctatcac
tacttttccattgggtggaacatttttgattttgttgtggtcattctttcaattgcaggt
cttttgctggcagatctcatcgagaagtactttgtgtcgcctacgctgtttcgtgtcatc
cgactggccagaattggccgcgtcctgcggctcatccggggtgccaaaggaatccggacg
ttactgtttgcgctgatgatgtcacttcctgccctcttcaacatcggcttgcttctattc
ttaatcatgtttattttctccatatttggcatgtccaactttgcctatgtgaaaaaagaa
gcgggcatcgatgacatgtttaatttcgagaccttcgggaacagtatcatatgtttgttc
atgatcacaacctccgccggctgggatggtttgttggcacctatactcaacagcccgcca
gactgcgacccggatgtggagaacccgggatcgcctgtccgaggaaactgcggcaatgct
gcggtaggcatcgtcttcttctgcagctacattgtcatgtccttcctcgtcgtggtcaac
atgtacatagccattatcctagaaaacttcaatgtagcgacggaagaaagtagcgacccc
ttgtgcgaggatgacttcgagatgttctatgaaacctgggagaagttcgaccccactgcc
tctcagttcatcgcttacagtagcctgtctgaattctgcgacacgctaaaagaccccctg
agaatcccgaaaccgaacacccttacattgatcacaatggaccttcccatggtccctggc
gataagatccactgtctggacattctcctggccctcactacacatgtgctgggagattct
ggccagatggatgccatgaaagcgactatggaggagaagttcatggccaacaatccctcg
aaggtttcgtacgagcccatcaccagcactctcagacggaagcaagaagaagtggccgct
tcgaccattcaaagtgcctaccgtaagcacgttctcaaacgtggcctcaaacaagcctca
tatatgtatagagagaagacaaactcaaagagacacggtgaagaggctccagaaaaggtg
gggatgatatctgagaaaatgagtcatctttatggagatcaagccattgaggacaacaaa
cctacgagtttctccttctctcaacgtgggaaaccactgtatggggttacagtgagagta
cagagggatgtggtcttgcactctgctccttttcccgctcctgactcgtcagccactgca
gaaaaattgagggagtccattgtgtaa
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integrated database retrieval system
