Carassius gibelio (silver crucian carp): 127948625
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Entry
127948625 CDS
T08819
Name
(RefSeq) F-box/WD repeat-containing protein 7 isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127948625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127948625
04121 Ubiquitin system [BR:
cgib04121
]
127948625
Membrane trafficking [BR:
cgib04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
127948625
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127948625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_C
WDR55
Beta-prop_SCAP
Beta-prop_WDR41
DSE1_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
F-box-like
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
ASA1
Beta-prop_DCAF12
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_EIPR1
WDR90_beta-prop_4th
F-box
Beta-prop_ACSF4
Beta-prop_RIG_1st
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_NOL10_N
CFAP251_N
PAC11
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
PQQ_2
WD40_RFWD3
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_LRRK2
Beta-prop_IFT140_1st
KNTC1_N
TRM82_WD
eIF2A
CDtoxinA
Beta-prop_IFT140_2nd
Beta-prop_pof12
PALB2_WD40
Beta-prop_WDR19_2nd
Vts1
Motif
Other DBs
NCBI-GeneID:
127948625
NCBI-ProteinID:
XP_052401156
LinkDB
All DBs
Position
B1:complement(15392691..15560022)
Genome browser
AA seq
759 aa
AA seq
DB search
MNQDLLSGGSGSRAAQEQRQRPGAAGAGNSTSGRTPQPQAEHMNRVLEEQEQVAQQQRRE
PVEEEEAGREQPREAEEEPWPSGGEPVDEGRRSEVNGAEKGAQWMWEQEQHRRHRRHREE
EEEEEDNNNAGREGQVGLRSEEDNDRPEDEEDGEEEMDQDSDEFEHSGESGREEEEEEEE
EAEDEEEGEEGPHSPSIRISVSDLNDNTDQSSGQHQSSPSVCKNKMKRKLDHGPEVRPFP
SGKKPCPSPTGLPYPATPTTFRDIRAVTGQGQQRRRIPSIQPPTGLQEWLRTFQSWSGPE
KLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPRELALHVLSFLEPKDLLQAAQTC
RYWRILAEDNLLWREKCKEDGIDEPLHIKRRKVIKPGFTHSPWKSAYIRQHRIDTNWRRG
DLKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ
MRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI
ETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ
FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI
KTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLWDLRTGEFIRNLVTLESGGS
GGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDMK
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggatctgctgtcggggggcagcggcagcagggcggcccaggagcagaggcag
aggcctggggcagcgggggcaggtaacagcacctccggccgcacacctcagccccaggcg
gagcacatgaatcgggtgctggaggagcaggagcaggtggcacagcaacagagaagagaa
cctgttgaggaggaagaggctggaagagagcagccaagggaggcagaggaggagccatgg
ccttccggaggtgagccggtggatgaaggacggaggagcgaggtgaacggggctgagaag
ggtgcccagtggatgtgggagcaggagcagcatcggcggcatagacggcatcgtgaggaa
gaggaggaggaggaggacaataataatgccggaagggaaggacaggtgggacttcgttca
gaagaagacaatgaccggccggaggatgaggaggatggtgaggaggaaatggaccaggat
agcgatgagtttgagcattcaggagagagtgggagggaagaggaggaggaagaggaggag
gaggctgaagatgaggaggaaggagaagaaggcccccactctccctccatcaggatcagt
gtgtcggaccttaatgataacacggaccagtcctctggacaacaccaaagctcaccctct
gtctgcaagaataagatgaagaggaagttggaccatggccccgaggttcgacctttccct
tcaggaaaaaagccctgtccaagtcccactggactgccgtacccagccacccccaccacg
tttagggacattcgagcagtcactgggcagggtcagcagagacgccgtatcccatccatc
cagccccctacaggcctgcaggagtggctccgcacctttcagagctggagcggcccagag
aagctgctggcgctggatgagttgattgacagctgtgagcccacgcaggtgaaacacatg
atgcaggtgatcgaaccccagtttcagagagacttcatctcactcctgcccagagagttg
gccttacacgtgttgtcatttctggagccaaaggatctgcttcaggcagctcagacgtgt
cgttactggcgcattctagcagaggacaacctgctctggagggaaaaatgcaaagaagat
ggtattgacgaacccttgcacataaagagaaggaaggttatcaagccagggttcacacac
agtccctggaagagtgcctacattagacaacacagaatagacaccaactggaggagagga
gacctcaaatcacctaaggtgttgaaaggccatgacgaccatgtcatcacctgtctccag
ttctgtggaaaccgcatagtgagcggctcggatgacaacacactcaaagtatggtctgct
gttactgggaagtgtttgaggacgttagtcggccacactggtggcgtctggtcctctcag
atgcgagacaacatcattatcagtggctccacagaccgaacgctgaaggtctggaatgca
gagacgggagaatgtatccacactctgtacggtcatacctcaacagtgcgctgtatgcac
ttgcatgagaaaagggttgtgagcggttcccgggacgctacgctgcgggtttgggacata
gagacgggtcagtgtttgcacgtgctcatgggtcatgtggcggccgttcgctgtgtacag
tatgacggccgtagggtggtcagcggggcctatgactttatggtgaaagtgtgggatcct
gaaaccgagacctgcctacacacactccagggtcacaccaacagagtctactctctacag
tttgacggcatccacgtggtgagcggttcattggacacgtcaattcgggtgtgggatgta
gagactggaaactgtattcacaccctcacaggtcatcagtctctcaccagcggcatggag
ctcaaagataatatcctagtctctggaaatgcagactccactgtcaagatctgggacatc
aagaccggccagtgcctacagacactgcaaggtccccacaagcaccagagtgcagtaaca
tgcctgcagttcaacaagaattttgtcatcaccagctccgatgacggtacggtgaagctg
tgggaccttcggacgggcgagtttatccgtaacctggtcacactggagagcggaggcagc
ggtggcgtggtctggcgcatccgcgcctccaataccaaactcgtttgtgcggtgggcagc
cgtaacggcacggaggaaaccaagctcctggtgctggactttgacgtggacatgaagtga
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integrated database retrieval system
