Carassius gibelio (silver crucian carp): 127948910
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Entry
127948910 CDS
T08819
Name
(RefSeq) guanine nucleotide exchange protein smcr8b
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127948910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127948910
Membrane trafficking [BR:
cgib04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
127948910
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
127948910
NCBI-ProteinID:
XP_052401712
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Position
B1:7375131..7381501
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AA seq
997 aa
AA seq
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MISSPDLVGFTKETEFSEIVIDPSVLPEELSVPLYPYNGDTTPWSKMSGANFTKDFILLS
EFSEQVGPQPLLTVPPETKACGTFDLNHFSLRIMSVDYQTSLTGPAGCGSLKLNFVEDSK
VVLGDSREGVFAYVHHLTLYDLEARGFVRPLCLAYVSSDENKIIQQFQQLAAEFSKVSEC
LKTGNRKNFATELEIKLRDLEYTRVVLLGEIERESNNASVMCANERECTLNGIPTLDVKL
KEKSLSHKDEIKLQGKGTCEISRKAEVECEKGNRSCITYDRDEQFGGRRKNKQDKGSCPT
PLPNKVDELANVEKSIQEYKSLLKQVTCFRTRKLRDSEYSPYEPEDLPHSFEFDLDDLRH
AGPVLECNILPCTDIPSHSLKPINNISSCRFDKRLKTLEELCDCYFHQQALQQLISIEKS
FRGDACHLYSQQLCHDLLCNLQSTNFLFEDSCDLEEEVGLQIGIAGQNSVRQPLFLPAPS
IFSEPVSLESYVSCVEMVPIKLELGGSSQSPAVPSSVNTPAKDNRPPKSYGVETEMENGG
VVSASDCQENVEMCVSALMKTSISSGDSIEVLGTEKSFRSQGSNILMETALQRPPPWSTT
TMLDGLRQGRVTTIRTCSEDSIEVLCTTESILPEDLRASYPCAIDEESPEQETVEKKISH
KQEDKQVECVYGEGNEVTGDHGGACMEEPQYFYPAVILTPPDCPMIMTISRSSSQDVCHA
SDSIPLPLLDEPCRMVPDDLSDCFSYRSTTASTTSECTFPTCLPKNKRGGTRRRHGRVGR
AALQFLRQFPFAVHAVFSLLCGRTLVVLGSEEAAVRRMVTALSVYMPHLSRYRDGIQPWT
STPLQLSDLLNWKLIGFNRMCCYTYTNMPHCLGHHSRYLSILDVDQKTLRCPVYNGTLLN
PLVESRNHFKRGNTYFMFAQSVHSNLVSTAFLLTFSHGFHTPRRPRESTWRQCFHSEIHR
DDKKILNYLSELIKLHFMDVPPNVLRFSYTTNSVFKL
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgattagttccccagacttggtgggtttcactaaagaaacagaattcagtgaaatagtc
atagacccatcagtacttccagaggaactgtcggttcctttgtatccctacaatggggac
accaccccatggtccaagatgtctggagctaattttacgaaggactttatccttttatca
gagttttcagagcaagttggtccccagcctttgcttacagttccccctgaaaccaaggct
tgtgggacatttgatttgaaccacttctcccttcggatcatgtcagtggactatcagacc
tcgctcaccggcccggcaggttgtggctctttgaaactaaactttgtagaagactcaaag
gtagttttaggagattctagagaaggagtgtttgcttatgtccaccaccttacactttac
gacctggaggctcgagggtttgtgcgacctctctgccttgcctatgtgtcatctgatgag
aataaaattatacagcaattccagcagcttgccgcagagttctccaaagtctctgaatgt
ctgaaaacagggaacaggaagaacttcgcaacggaactggagataaaactgagagatttg
gagtatacaagagtcgtgttacttggagaaatagaaagagagtcaaataatgcatctgta
atgtgtgccaatgaaagggaatgcacgttaaatggtatacctacattagatgtgaaactg
aaagagaaatcactatctcacaaagatgaaatcaaattacaagggaaaggcacatgtgaa
atttcaagaaaggcagaagtagagtgtgaaaaagggaataggtcttgtataacttatgac
agagatgaacagtttggaggaagaaggaagaacaagcaggataaaggatcttgcccaaca
ccattgcccaacaaagttgatgaactggccaatgtagaaaaatcaattcaagaatacaaa
agccttctaaaacaggtcacttgcttccgaactaggaagcttagagactctgaatattct
ccttatgaacccgaagaccttcctcattcttttgagtttgacctggatgatttaaggcat
gctgggccagtgctagaatgtaatattttaccttgcacggacataccctcacattctctg
aagccaattaacaacatttcatcttgtcgatttgacaagcgtctgaaaactctcgaagag
ttgtgtgattgctacttccaccaacaagctctacagcaactgatctccattgaaaagtca
ttcagaggagacgcctgccatctctactcacagcaactttgccatgatcttctctgcaac
ctccaatctaccaatttcttatttgaggattcatgtgacttggaagaggaagtggggttg
cagattggaatagctggtcagaattcagtccgacaacccttgtttcttcctgcaccatca
atttttagtgaacctgtcagtcttgagtcatatgtctcctgtgttgaaatggtgccaatc
aaactagagctgggtggatctagccaatctccggctgtacccagctctgtaaatacccca
gccaaggataaccgacccccaaaatcctatggagtagagactgaaatggaaaatgggggt
gtagtttcagcttcagattgccaagaaaatgtggaaatgtgtgtttcagctttgatgaag
accagtattagtagtggagatagtattgaggtcttagggacagagaagtccttcagatcc
cagggttcaaatatactaatggaaacagcactgcaaagacctccaccttggtccactaca
accatgctagatggtctgaggcaagggagggtaactaccatacggacttgtagtgaagac
agcattgaggtgctctgcacaacggaatcaatcctaccagaagacctgcgtgcttcatac
ccttgtgcaattgatgaagaaagtccagaacaagagactgttgagaaaaaaatatctcac
aaacaagaggacaaacaagttgagtgtgtttacggtgagggaaatgaagtcactggagat
catggaggtgcctgtatggaggagccgcaatatttttatcctgcggtcatcttaacccca
cctgactgtcctatgattatgacaattagtcggtcaagctcccaagatgtttgtcatgca
tccgattcaatacctctccctttgttagatgagccctgccgaatggtacccgatgattta
tcagactgcttcagctataggagcaccactgcctctacaacctccgaatgcacttttcct
acttgtcttccaaagaataaaagaggtgggaccagacggagacatggcagagtaggacga
gcagcgttgcagtttttgcgacagtttccctttgcagtacatgcagtttttagccttctg
tgtggccgaactttggtagtactaggcagcgaggaggctgcagtgaggcggatggttaca
gcactgtctgtgtacatgccacatctgagtagatacagagacggcattcaaccttggact
tcaacaccgctgcagctatcggacctgctcaactggaaacttatcggctttaacaggatg
tgttgttatacttacacaaatatgcctcactgcctgggccatcacagccgatacctcagt
attctagatgtggatcaaaagacactgcgctgcccagtctacaatggtactcttctcaac
ccgctggtggaatcaagaaaccactttaaacgtggaaacacctacttcatgtttgctcaa
agtgtgcacagcaatcttgtcagcacagcattccttttaacattttcgcatggtttccat
acaccgagaagacctcgggagagtacatggagacaatgttttcattctgaaattcacaga
gacgataagaaaatccttaattatttatctgaactcatcaagctgcatttcatggatgtt
ccacctaatgtcctcagattcagctacaccacaaactctgttttcaaactgtga
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