Carassius gibelio (silver crucian carp): 127951028
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Entry
127951028 CDS
T08819
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04514
Cell adhesion molecules
cgib04520
Adherens junction
cgib04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127951028
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
127951028
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
127951028
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
127951028
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127951028
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
127951028
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
127951028
Cell adhesion molecules [BR:
cgib04515
]
Immunoglobulin superfamily
Type II RPTP family
127951028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Tc-R-P
PTP-SAK
V-set
DSPc
C2-set_2
Y_phosphatase3
Ig_C17orf99
PTPlike_phytase
PTP-NADK
Fn3_PTPRU
Fn3_ELFN
ICAM_N
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
127951028
NCBI-ProteinID:
XP_052404584
LinkDB
All DBs
Position
B2:complement(12261433..12440595)
Genome browser
AA seq
1913 aa
AA seq
DB search
MVPNICTSVPLLPVGLPLLLLLSCVQFSSQADSLPNFIKSPEDQTGISGGVASFVCQAAG
EPKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSVGEINT
SAKLTVLEENQIPHGFPTIDMGPQLKVVERTRTTTMLCAASGNPDPEITWFKDFLPVDIN
GNGRIKQLRSGGSPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVPPR
FSIPPTNHEVMPGGSVNLTCVAVGAPMPYVKWMAGEVELTKDEEMPVGRNVLELTNIRQS
TNYTCVAISSLGMIEATAQVSVKALPKPPTSLIVTETTATSVTLTWDSGNPEPVSYYIIQ
YRAKSSDTSFQEVDGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSDPVETRTGEQAP
SSPPLHVQARMLSASTMLVQWEPPEEPNGQIRGYRIYFTSDLDAPLSAWQKHNTDDSRLT
TISSLTPDITYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQPSNFEAEAELDTRIQLTWL
WPVQDPIIKYELQYWEADSENKIHVTFEPAGSYAVEGLKPDTLYKFSLAARSEMGLGVFT
QPIEARTAQSTPSAPPQEVHLLSLSSTSIKVSWVAPPAASRHGAIVRYTVSYQAVNGEDT
ERHEVPDIGADATSYVLEGLEKWTEYQVWVRAHTDVGPGPESTAVRVRTNEDVPGAPPRK
VEVEAVNSTAIRVTWKPPISGKQHGQIRGYQVIYSRLENGEPRSQPNILDVALPEAQWKM
EESTEYEAVITGLLSETSYSVTVAAYTTKGDGARSKAKVVTTTGAVPGKPTMIISTTVGN
TALIQWQPPKDMVGELIGYRLRYKCVEEENYEVREFTRTDDHHTATELYKGATYTFHLSA
KNRAGAGEEYVKEISTPEDVPSGFPLNLRVVGLTTSTTRLAWDPPALSERNGRITQYLVM
YRDINNIQNGTNRTSDTQMTIQGLRPDTTYDIRVQAFTSKGGGPISPSIQSRTMSTSPAF
ATSFGVKAVMKTSVLLTWELPENYKSQVPFKILYNQQSVEVQGNLKRKLITRLQPDTNYS
FVLMSRGNSAGGLQQQVSIRTAPDLFKTKPVLFTTDQSSNGKLTINLPKVPTTAPVRWYY
IVVMPGSLASSRKWVNPDEMELDELLESTEGALLRRRRHTDTVRPYIAAKLASLPDTFTL
GDEKTYNGFYNRPLPNNHYQCFVMAELKDQYPVIANEKQRTFSASPYSDPIVVPDIPVIQ
PSVEQPEMLWVMGPVLAVVLIVIIVIAILLFKRKRASPLPKDDHSGGVKDCLLANSSDPV
EMRRLNYQTPGMREHPPISVCELADHIERLKANDALRFSQEYESIDPGQQFTWENSNLEV
NKPKNRYANVIAYDHSRVVLTPVDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDF
WRMVWEQRANTIVMMTRLEEKTRVKCDQYWPIRGTETYGMIQVTMLDAVELATYSVRTFA
LYKNGSSEKREVRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCSAGVGR
TGCFIDIDAMLERMKHEKTVDIYGHVTCMRAQRNYMVQTEDQYIFIHEALLEAATCGNTE
VPARNLYAHIQKLTQPPPGETVTAMELEFKRLANSKAHTSRFISANLPCNKFKNRLVNIM
PFESTRVCLQPIRGVEGSDYINASCIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTI
VVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRT
IRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSI
VLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaatatttgcacgtctgtgcccctcctgcccgttgggcttcctcttctgcta
ctgctgagctgcgtgcaattctcctctcaggcagacagcttgccaaatttcatcaaatct
ccagaggaccagacggggatttcgggaggagtggcatcctttgtgtgccaagcagcgggt
gagccgaagcctcggatcacatggatgaagaaaggaaagaaagttagctcccagcgcttt
gaggtgattgaatttgatgatggctcgggctcagttctccgcatacagccgctgcgtact
cacagagatgaggccatctatgagtgcacagccaccaacagcgtgggagaaatcaacacc
agtgccaaacttactgtgctggaagaaaaccagattcctcatggcttccccaccatagac
atgggccctcagctgaaagtggttgagcgaacaagaacaaccacgatgctctgtgccgcc
agtgggaaccctgacccagagatcacttggttcaaggacttcctgcctgtagacatcaac
ggcaatgggcgaatcaaacagcttcggtcagggggttcgccaatacgaggagctctgcag
attgaaaacagcgaggaatcagaccagggcaagtacgaatgtgtggctacgaacagcgcc
gggacgcgctactcggcccctgccaatctctacgtgcgagttcgacgagtgccgccccgt
ttctctatcccacctaccaaccacgaggtgatgccagggggcagtgtcaacctcacctgt
gtggcagtaggtgcccccatgccctacgtcaaatggatggctggagaggtggagctcacc
aaggacgaggaaatgcccgtgggacgcaatgtcctggagctcaccaacatccgtcagtcg
accaactacacctgtgtggctatctcatctctcggtatgatcgaggcaactgcgcaagtt
tctgtcaaagcactcccaaagcctcctacgtctctaattgtgacggaaaccacagctacc
agtgttacactgacatgggattctggaaaccctgaacctgtgtcttactacattatccag
tacagagccaagtcctctgacaccagcttccaggaagtggatggtgttgccaccacacgt
tatagcatcggcggtctcagcccttattccgagtatgagttccgtgtcatggcggtcaac
aacattggccgtgggccacccagcgacccagttgaaacaaggacgggtgagcaggcacct
tcctccccaccattgcatgtccaggcacgtatgctgagtgccagcaccatgttggtgcag
tgggaaccgccggaggaacctaatggtcagattagaggctatcgcatctacttcacatct
gacctggatgcacctctcagcgcctggcagaaacacaacacagatgacagccgtctcaca
accatctcgagcctgacccccgacatcacctacagcctacgtgtattgggctttacatct
gtaggggatggacccccatctgatgtgttgcaagtcaagacacagcaaggagtccctgca
cagccttccaactttgaggccgaagcagagctggatacacggatccagctaacttggctg
tggccagtccaggaccccattatcaaatatgagctgcaatattgggaggctgactcagag
aacaagatccatgtgacctttgaacctgccggctcgtacgctgttgaaggtctaaagcca
gacactctgtataaattctccttggcagcccgctctgaaatggggctaggggtcttcact
caacccatcgaggccaggaccgcccagtccaccccctcggccccccctcaagaggtgcac
ctgctcagtctgagctccaccagcatcaaggtgagttgggtggcaccgcccgccgctagt
cgccatggcgctattgtgcgatacacagtcagctaccaggcagtgaacggagaagacact
gagcgccatgaggtaccggacattggagcggatgccaccagctatgtgctggagggcctg
gagaagtggacggagtatcaggtgtgggtgagagcgcacaccgatgtgggccccggccct
gagagcacagctgtgcgtgtccgtaccaacgaggacgtgcctggagccccacctcggaaa
gttgaagtagaggctgtgaactccacagctattcgtgtgacatggaagccgcctatttct
gggaagcagcacggccagatccggggataccaggtcatatactcccgtctagagaacgga
gagccgcgtagccagccaaatatattggatgttgctctgcctgaagcacagtggaaaatg
gaagagtccacggaatatgaggctgtgatcactggacttctctccgagacctcttactct
gttactgtggcagcatacactaccaagggagatggggcacgcagcaaagccaaagttgtc
accaccaccggagcagtgcctgggaaacccactatgatcatcagcaccaccgttggcaac
acagccctcatccagtggcagcctcctaaggacatggtgggtgagctgattggctaccga
ctgcggtacaagtgtgtggaggaagagaactacgaagtgcgtgagttcacacgcaccgac
gaccaccacaccgccacagaactgtacaagggtgccacctacaccttccacctgagcgcc
aagaaccgggcgggagctggagaggagtacgtaaaagagatcagcaccccggaggacgtg
ccaagtgggtttcccctaaacctacgcgttgtgggcctgaccacctccaccacccgtctt
gcctgggaccccccggccctgtctgagcgcaacggccggatcacacaatacctagtgatg
taccgtgacatcaacaacatacagaacggcaccaatcgcacatctgacactcagatgacc
atccaagggcttcgaccagacaccacctatgatatccgtgtgcaagccttcaccagcaaa
ggagggggtcccataagtcctagtatccagagcaggaccatgtctacatcacctgcattt
gccacaagttttggtgtcaaagctgtgatgaaaacctcggtccttctcacctgggagcta
ccagaaaattacaaatcccaagtgccttttaagatcctctataaccagcagagtgtggaa
gtccagggcaacctcaagaggaagctgatcacacgactgcagccagacactaattactcc
tttgtgctgatgagccggggaaacagcgctggtggcctgcaacagcaggtctccattcgt
accgcacccgacctgttcaaaactaaacctgtcttgttcacaacagaccagagcagcaat
ggtaaactcaccattaacctgcccaaagtgcccaccacagctcctgtcaggtggtactac
attgttgtcatgcccgggtctcttgcatcatctcgtaaatgggttaatcctgacgagatg
gagctggatgagctcttggaatctactgagggagctctgctcaggagacgacgtcacacg
gacactgttaggccgtacatcgccgcaaagctggcctccctcccagacaccttcaccctg
ggcgacgaaaagacatacaatggcttctacaaccgtccccttcctaacaaccactatcag
tgctttgtcatggctgaactcaaggaccaatacccagttattgccaatgagaagcagcgg
accttctcggccagcccatactcggaccccatcgtcgtgccggatatacccgttatccag
cccagtgtggaacagcctgagatgctttgggttatgggccccgttcttgcagtagtgctc
atcgtcatcatagtcatcgccatcctgctcttcaagaggaagagggcgtcccccctaccg
aaagatgatcactctgggggtgtgaaggattgtcttctggccaactcgtctgatcctgta
gaaatgaggagactcaactaccagacaccaggaatgagggaacatccgcctatttctgtc
tgtgagctagcagaccacattgagcgactcaaggccaacgatgcccttcgattttcccag
gagtatgagtccattgatccaggccagcagttcacatgggagaactccaacttggaggtc
aacaagccaaagaaccgttacgccaacgtcattgcttacgaccactcaagagttgttctc
acccctgtggacggtgttccaggcagcgactacatcaatgccaactacatcgatggttac
cgtaagcagaatgcctacattgccacgcagggccctctgcctgagactctgagcgacttc
tggaggatggtttgggagcagagagccaataccatcgtcatgatgacaagactggaagag
aagaccagggtcaagtgtgaccagtattggcccattcgtggcacagagacttacggaatg
atccaagtgaccatgcttgacgctgttgagttggcaacttacagtgtgcgaacctttgcc
ctttacaagaatggctctagcgagaaacgcgaagtcaggcagttccagttcatggcctgg
ccagaccacggagtgcctgaataccccacccccatcctagccttcctgcgcagggtcaaa
gcctgcaaccctcctgatgctggacccatggtagtgcactgcagtgctggagtgggccgc
acgggctgcttcatagatattgacgccatgctggagcggatgaaacatgaaaagacggta
gacatttatggccacgtcacatgcatgagagcccagaggaactacatggtgcagacggag
gaccagtacatcttcatccacgaggccttgctggaggccgccacctgtggaaacacagag
gtccctgcacgaaacctctacgcccacatccagaagctcacccagccaccgccgggagag
accgtcacagccatggagctggagtttaagagactcgctaactccaaagcccacacctct
cgattcatcagcgccaacctgccctgcaacaagttcaagaaccggctcgtcaatatcatg
ccttttgagtccacacgggtgtgcctgcagccaatccgaggagtggaggggtctgactac
atcaatgccagctgcatcgatggatacagacagcagaaggcctatattgccactcagggc
cctctagcagagaccactgaggacttctggaggatgctatgggagcacaattccactatt
gtagtgatgctgaccaaactccgagagatgggacgggagaagtgtcatcagtactggcca
gctgagcgctcggcccgctatcagtacttcgtggtggatcccatggctgagtacaacatg
ccccagtacatcctgcgagagtttaaagtcacagatgccagggacggtcaatccagaacc
attcggcagttccagttcactgattggccggagcaaggagtgccaaaaactggcgaggga
ttcattgatttcattggccaagttcataaaaccaaggagcagtttgggcaggatggacca
atcactgtgcactgcagtgctggagtgggaagaacaggtgttttcatcactctcagtatt
gtcctggagaggatgagatatgagggtgtggtggatctgttccagacggttaagaccctg
cgcacacaaaggcctgccatggtgcagacagaggaccagtaccagctgtgctacagagcc
gctttggagtacttggggagctttgatcactatgcaacgtaa
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integrated database retrieval system
