Carassius gibelio (silver crucian carp): 127951572
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Entry
127951572 CDS
T08819
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1 homolog isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127951572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127951572
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgib04054
]
127951572
Membrane trafficking [BR:
cgib04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
127951572
Pattern recognition receptors [BR:
cgib04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127951572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
nSTAND3
FISNA
AAA_16
CBM65_1
AAA_25
Motif
Other DBs
NCBI-GeneID:
127951572
NCBI-ProteinID:
XP_052405496
LinkDB
All DBs
Position
B2:26425080..26441851
Genome browser
AA seq
1350 aa
AA seq
DB search
MTSEDPLILSVYILPLFDTFSKEKIKHEETANNPHVLEIEHPSPSMKIQMDTPHVLKVSG
ASVDSEEGITFLSSIHPVVFKIKQDIDGDVQMTLIKQQHEMFVWKTVICKDKLNQKKKEM
RNLMARFGRLSTEMRKHIPEGQKQKPRKRRSDIILLYKASVIDKRKFVTECNLQTDECVE
LAARYTEPVIIQKSKEQTEKYYREHVRSAHASGLNTSTHLLSNDKNQSIRIDQLFSPDSD
GNTQKTVVLSGDSGRGKSFTLQKIMLDWASGELYSENFDVVFLFKCEELKCIFEEMSLFE
LLSWSCSLTLDQISQILELTTPEKVLFLIDGIDEYVSHPPSHSMLVLTNPSHRARPMVIL
RSVLKGILLPESFILVTTRSRAADAVMNLLKGPQRFTEIMGFSERGVQEYFQKFFQDEQL
FRKMYERVKINENLLTACSVPLLCWMVCFCLKKHITDDDGVMRELKTSTSIYVHFVSTLL
EHHDQSQSVLTMLRSLGHRAEEGVKKREGLFVEKSVTATGLDPATNVFLYKDSLKRNNRQ
VSVFKFMHLSFQEFFTALFYVLLDKKESWEKVTDLLNSLKMKGIINRPSPERRTNPIPSV
MMFLCGLLNEKTSSSLFEIIKWTVPQIIKLKTNLQESLLTVRRQHGCELFAMCCLYELQD
EKVVRRALGDWVSINLYSVPLRSTDCWVLLYCLQCCPNIRYLNLMYCDLTAEKLKILQPA
LCMCENLRLSVKHLSEFGDLIQVLGKSKFLKKMRIQESENSAENPRWSLELSVTRGDVLL
SLSSSEKNLSFPGVLNITLTCPQSELSSTDWTLFLHRLSKTEKVAEDSSALDEHVSLLLS
SFHSVGLKTLNLKLVSLNESWASGIIFLSQTCTSLQELRVSVTGLLLEEGLTLLKKSLTE
PHCTVIIEGRKCSKLTDQCKEQDWSHSCNEKVEIHFKPKVLKNLKELTISYSEQSGLNLQ
PLPVCQSCVHIVDSDQWVQVEPSVCTDEGGSEFRISTPAGRFECSRTRMRWICAGEITLQ
YRAVDGGFLSEELERLQCERIGPVIDVTVISGKLEEAHLPHYACLAESDPSLTQSVKVLS
VEDEGISLESVELTRFHAKILKPSFSPKTMLMKLGISVKVHCDLLIFMTQKNPIILHVYF
FPSDSLFKEKIKTEEKLSHPIKCSRPETPLRMMKQHSLDVHGASVQPEAIKLRGDIEPNF
FQVKHPVDNDIKMSLSQVDDQKSVWTATVWKELINMHPNRAENLFQTGQNQNTPRLSVNF
DKVQFFDRNWCALIRSVENVNNIADNLLQKQIIHEELYSEITHPTSTSEASMRKICSIVR
KGSDTVKEMFICILLEEDPDLLNHLPLSDS
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcgaagatcctcttattctcagtgtctacattcttccactgtttgatactttt
tcaaaggaaaaaattaagcatgaagaaacagctaataatcctcatgtccttgaaattgag
caccctagccctagcatgaaaattcaaatggacacaccacatgttcttaaagtatccggt
gccagcgtagattccgaagaagggattacatttttaagcagtattcacccagtcgtcttc
aaaatcaaacaagacatagatggggacgttcagatgactctcatcaaacagcagcatgaa
atgtttgtgtggaaaacagtcatttgcaaagacaaacttaatcagaaaaaaaaagaaatg
agaaatttaatggccaggtttggcaggttgtccacagaaatgagaaagcacatccctgaa
ggacagaagcagaagccacggaaacgtaggagtgacataattcttctctataaagcatca
gtaattgataaacgtaagtttgtgaccgagtgtaatcttcaaactgatgaatgtgtggag
ctggctgcccgttacactgaaccagtgatcattcagaagagcaaagagcagactgagaaa
tactatcgtgagcatgtgaggtctgcacatgcttctggactgaatacatctactcatctg
ttatcaaatgacaagaatcaaagcatcagaatagaccagctgttcagtcctgacagtgat
ggaaacacacagaaaactgtggttctcagtggagattctggaagagggaaatccttcacg
ctacagaagatcatgttggactgggcttctggagaactttactctgaaaactttgatgta
gtttttttgtttaagtgtgaagagctgaagtgtatttttgaggagatgagcttgtttgag
cttttgagctggagttgcagcttaacattggatcagatctcacagatactggagttaaca
acaccagagaaagtcctcttcctcattgatgggattgatgaatatgtttctcatccaccc
agtcattcgatgttagtactcactaatccatctcatagagcccgacccatggtcattctt
aggagcgtgttaaagggaatcttgttgcctgagtcattcattcttgtcaccacaagatct
cgagctgctgatgcagtgatgaacctcctcaagggtcctcagcgtttcactgagattatg
ggcttctctgagagaggggtgcaggagtacttccagaagttctttcaggatgaacagctc
ttcaggaaaatgtatgagagagtgaagataaatgaaaacctcctgactgcttgctctgtg
cctttgctgtgttggatggtctgtttttgtctgaagaaacacataacagatgatgatggt
gtgatgagagaactaaagacaagcacctccatatatgtgcactttgtgtccactctactg
gagcatcatgaccagagtcagtctgtcctcaccatgctgaggagcctgggtcatcgggca
gaggaaggggtgaagaagcgagaaggtctttttgtagagaagagtgtgactgcgactggc
ttagatcctgctactaatgtgttcttgtataaagatagtttgaaaagaaataacagacag
gtgtcagtgttcaagttcatgcatctcagcttccaggagtttttcactgctcttttttat
gttttactggataaaaaagagtcctgggagaaagtcacagatctgttgaactccctgaaa
atgaagggtataatcaataggccttctccagaaagaagaacaaatcccatcccttcagtc
atgatgtttctctgtggtctcttaaatgagaagacgagcagctcactctttgaaataatc
aagtggactgttcctcaaatcataaaactaaagacaaacctgcaggaaagtcttcttaca
gtgaggagacagcatggatgtgaactgtttgctatgtgctgtctgtatgagctccaggat
gagaaagttgtgaggagagctttaggagactgggtatccatcaatctgtatagcgttccc
ctgaggagcacagattgctgggtgctgctgtactgtcttcagtgctgtccaaacatcaga
tacctgaacctcatgtactgtgatttaacagctgagaaactcaagattcttcagccagcg
ctctgtatgtgtgagaatctgaggttgtcagtaaagcacctgtcagaatttggagatttg
atccaggttcttggtaaatctaagttcctgaaaaaaatgaggattcaggaaagtgagaac
agtgctgagaatcccagatggtcacttgagctgtcagtgactcgtggagatgttctgttg
tctttgagctcctcagaaaagaatctatcgtttccaggagtcttaaacatcacacttaca
tgtccacaatcagagttatccagcactgactggacactcttcttacatagactcagcaag
acagaaaaagtagcagaagattcttcagctcttgatgagcatgtcagtttgttgctgtct
tcatttcactctgtgggtttgaagacgttgaatctgaagctggtcagtctgaatgagagc
tgggcttctgggattattttcctttcccagacctgcaccagtctacaggaactcagagtc
agtgtcactggattgcttttggaggaggggctcacgttactgaagaaatcactgacagag
ccacactgcactgtgatcatcgaagggaggaaatgcagtaaactcactgatcagtgcaaa
gaacaggactggagtcacagctgtaatgagaaagtagagattcacttcaaaccaaaggtt
ttgaaaaaccttaaagagctgaccatctcttactcagaacaatctggactgaatcttcag
ccgctcccagtgtgtcagtcttgtgttcacattgttgactctgatcagtgggttcaggtg
gagccgtcagtctgtacagatgaaggaggctcagagttcaggatcagcactccggcgggt
cgattcgagtgcagcaggaccagaatgcgatggatctgtgctggtgaaatcactctccag
tatcgtgcagtggatggaggtttcctcagtgaagagctggagaggcttcagtgtgagaga
attggtcctgtgattgatgtgacagtgatctcagggaaactggaggaggcacatctacct
cattatgcctgtttggcagagtcagacccctctctcacacaaagtgtaaaggtcctcagt
gttgaagatgagggaatatccttggaatcagtggagttaactcgttttcatgccaaaata
cttaaaccatctttttctcctaaaacgatgcttatgaaactagggatatcagtaaaagtg
cactgtgatctactgatcttcatgacacaaaagaaccccatcattctccatgtgtatttt
ttcccatcagattcactttttaaagaaaaaattaaaacagaggaaaaactgagtcatcca
atcaagtgttcaagacctgaaactccactgcgtatgatgaaacaacacagtcttgatgtt
catggtgcatctgtccaacctgaagcaatcaaattaagaggtgacatcgagccaaacttc
tttcaggtcaaacatcctgtggacaatgacatcaaaatgtcactcagccaagttgatgat
cagaaatcagtttggactgcaacagtttggaaagaattaatcaacatgcatccaaacagg
gctgagaatttgtttcaaacaggacaaaaccaaaatacaccacgattgtctgtcaacttt
gataaagttcagttttttgatagaaattggtgtgctcttattagaagtgttgagaatgta
aataacattgcagacaatctgctgcaaaagcaaatcattcatgaagaattatattctgaa
atcacacatccaacttcaaccagtgaagccagcatgaggaagatctgcagtatagtgcgt
aaaggtagtgacactgtgaaagaaatgttcatctgcattcttctggaagaagatcccgac
cttttaaatcatttgcctttatctgactcttaa
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