Carassius gibelio (silver crucian carp): 127951573
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Entry
127951573 CDS
T08819
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 1 homolog
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127951573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127951573
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgib04054
]
127951573
Membrane trafficking [BR:
cgib04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
127951573
Pattern recognition receptors [BR:
cgib04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127951573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
zf-C3HC4_4
NLRC4_HD2
CARD
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
NOD2_WH
zf-RING_2
zf-RING_5
nSTAND3
U-box
AAA_25
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
127951573
NCBI-ProteinID:
XP_052405500
LinkDB
All DBs
Position
B2:26408492..26421408
Genome browser
AA seq
1311 aa
AA seq
DB search
MAEASISWDEDRVICTICLDLLKDPVTIPCGHSYCMKCITGYWDHDDQKRVYSCPQCRQT
FTPSPLLGKDKRTEKQKKEKGPTYCICLAASYDLDYGEIEAFKGYLQPRLTRDDLQRQVM
KIYGRGQSNMICWYKSSVFDKSKLVAECNLDERVYLAFCYTEPVIIQKSKEQTEKYYREH
VRSVDASSHLLSNDKNHSIRIDQLFSPDSDENTPKTVILSGDSGRGKSFTLQKIMLDWAS
GELYSENFDVVFLLKFEELKCISEEMSLFELLSWSCSLKSYQISQILELTTPEKVLFLID
GIDEYVSHPPSHSMLVLTNPSHRARPMDILRSVLKGILLPESFILVTTRSLAADAVMNLL
KGPQRFTEIMGFSERGVQEYFQKFFQDEQLFRKMYERVKINENLLTACSVPLLCWMVCFC
LKKHLTDDDRVMRELKTNTSIYVHFVSTLLEHHDQSQSVLTMLRSLGQLAERGIQNQQVF
FDEKSVAKTGLDPATNLFLYKGDLREKHEPVYKFIHFSFQEFFAALNYVLLDEEVSWWKV
SELFKLMESEALICWSSPVLRSRLSNPIPSVMMFLCGLLNEKVSSSIFQKIRLTVPHTMK
LKKRELKKKLMKRITAMTRQYGFELFALHCLYEFKDERFVMEALKTHNLMDLSNITLRST
DCWVLLYCLQCCPNIRYLNLMYCDLTAEKLKILQPALCMCENLRFSVEYLSEVGDLIQIL
WEAEILRELKVQEDENSSESPRWXTRGDVLLSLSSSEKNPSFPAVLNISLTCPQSELSST
DWTLFLQRLSKTGKVADDSSALDEHVSLLLSSFHSVGLKTLNLKLVSLNKSWASGIISLV
KTCTSLQQLNVCVTGLLLEEGLTLLKKSLTDPHCTVIIKGRKCSKPTDQCKEQDWSHSCN
EKVKIHLEPKVLEELEDLNISEPEPSDMNLYCQSCVHIVDSDQWVQVEPSVCTDEGGSEF
RISTPAGRFECSRTRMRWICAGDITLQYRAVDGGFLSEELERLQCERIGPVIDVTVISGK
LEEAHLPHYACLAESDPSLRDAVKLLTKRDEGISLQSVELNRYHAKIVQPSFSLTSLIIS
WFIKWEEHCNLLLYMRCKDPLILHIYFFPVNDTCSKGKVEQNEKSSLLISHPRPNRPFRL
KTPHLLEVPGASVHPIEGISFRTDIDPNFFKVKQHQHDDVKMNLIREEDGKSVWKATIWK
EEFAAINTRQVQEELHLCSEFDKLQFFEKHRSTLIKRVKNVKSIADKLYEQRIIHEELYS
EITYTNLTSQDSMRKICYSVHSSGVFAKGKFIVVLQEEEPHLFEELVRSDA
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagccagtatttcatgggatgaggatcgggtcatctgtacaatctgtctggat
ctactgaaggatccagtgaccattccctgtggacacagctactgtatgaagtgtattaca
ggttactgggatcacgatgatcagaagagagtctacagctgccctcaatgcagacaaacc
ttcactccaagccctttgttaggtaaagacaagaggactgaaaaacagaaaaaagaaaaa
ggacctacttattgcatatgcttggcagcttcttatgatctggactatggtgaaattgaa
gcgttcaagggttacttacaacctagacttacaagagatgacctacaaagacaggtgatg
aaaatatatggaagaggacagagcaacatgatttgttggtacaagtcttcagtctttgac
aaatctaagttagtggcagagtgtaatcttgatgaacgtgtgtatctggccttctgttat
actgaaccagtgatcattcagaagagcaaagagcagactgagaaatactatcgtgaacat
gtgaggtctgtggatgcttcatctcatctgttatcaaatgacaagaatcacagcatcaga
atagaccagctgttcagtccggacagtgatgaaaacacaccgaaaactgtgattctcagt
ggagattctggaagagggaaatccttcacgctacagaagatcatgttggactgggcttct
ggagaactttactctgaaaactttgatgtagtttttcttctgaagtttgaagagctgaag
tgtatttctgaggagatgagcttatttgagcttttgagctggagttgcagcttaaaatcg
tatcagatctcacagatactggagttaacaacaccagagaaagtcctcttcctcattgat
ggaattgatgaatatgtatctcatccacccagtcattcgatgttagtactcactaatcca
tctcatagagcccgacccatggacattcttaggagcgtgttaaagggaatcttgctgcct
gagtcattcattcttgtcaccacaagatctctagctgctgatgcagtgatgaacctcctc
aagggtcctcagcgtttcactgagattatgggcttctctgagagaggggtgcaggagtac
ttccagaagttctttcaggatgaacagctcttcaggaaaatgtatgagagagtgaagata
aatgaaaacctcctgactgcctgctctgtgcctttgctgtgttggatggtctgtttttgt
ctgaagaaacacttaacagatgatgatcgtgtgatgagagaactaaagacaaacacctcc
atatatgtgcactttgtgtccactctactggagcatcatgaccagagtcagtctgtcctc
accatgctgaggagtctgggtcagctggcagagagaggaatacaaaatcaacaagtcttt
tttgatgaaaagagtgtagccaagactggcttagatccagctactaatttgttcttatat
aaaggtgaccttagagaaaaacatgaaccagtttataagtttatccatttcagctttcag
gagttcttcgctgcgcttaattatgtgttgttagatgaagaagtgtcctggtggaaagtc
agtgagctgtttaaattgatggaatcagaagctttaatttgctggtcatctcctgttttg
agaagtagactatcaaatcccatcccttcagtcatgatgtttctctgtggtctcttaaat
gagaaggtgagcagctcaatctttcaaaagatcaggttaacggttcctcacaccatgaaa
ctgaaaaaaagggaactaaagaaaaagttgatgaaaaggattactgcaatgacacggcag
tatggatttgagctgtttgctctccactgtctgtatgagttcaaggatgagagatttgtc
atggaagctcttaaaacacacaacctcatggatctgtctaacattactctgaggagcaca
gattgctgggtgctgctgtactgtcttcagtgctgtccaaacatcagatacctgaacctc
atgtactgcgatttaacagctgagaaactcaagattcttcagccagcgctctgtatgtgt
gagaatctgaggttttcagtggagtacctgtcagaagttggagatttgatccagattctc
tgggaagctgaaatcttgagagaactgaaagttcaggaagatgagaacagttctgaaagt
cccagatggntcactcgtggagatgtcttgttgtctttgagctcctcggagaagaatccg
tcatttccagcagtcttgaacatcagtcttacatgtccacaatcagagttatccagcact
gactggacactcttcttacagagactcagcaagacaggaaaagtagcagacgattcttca
gctcttgatgagcatgtcagtttgttgctgtcttcatttcactctgtgggtttgaagacg
ttgaatctgaagctggtcagtctgaataagagctgggcttctgggattatttctcttgtc
aagacctgcaccagtctacagcagctcaatgtctgtgtcactggattgcttttggaggag
ggtctcacattactgaagaaatcactgacagatccacactgcactgtgatcattaaaggg
aggaagtgcagtaaacccactgaccagtgcaaagaacaggactggagtcacagctgtaat
gagaaagtgaagattcacctcgaaccaaaggttttggaagagctggaagatctgaacatc
tctgagccggaaccatctgacatgaatctttactgtcagtcttgtgttcacattgttgac
tctgatcagtgggttcaggtggagccgtcagtctgtacagatgaaggaggctcagagttc
aggatcagcactccggcgggtcgattcgagtgcagcaggaccagaatgcgatggatctgt
gctggtgacatcactctccagtatcgtgcagtggatggaggtttcctcagtgaagagctg
gagaggcttcagtgtgagagaattggtcctgtgattgatgtgacagtgatctcagggaaa
ctggaggaggcacatctacctcattacgcctgtttagcagagtcagacccctctctcaga
gatgctgtgaagctcctcaccaaaagagatgaaggaatatctttacaatctgtagagctg
aaccgttatcatgccaaaatagtccaaccatccttctctcttacatctctaatcataagc
tggttcataaagtgggaagagcactgtaatcttcttctgtatatgcggtgtaaagatcct
ctcattcttcacatctacttttttccagtgaatgacacttgttcaaaaggaaaagttgag
cagaatgaaaaatccagtcttttgattagccatcccagacctaacagaccatttcggttg
aaaacacctcacctccttgaggttcctggtgcatctgtccatcccatagaggggatttca
tttagaacagacattgacccaaacttcttcaaggtcaagcaacatcagcatgacgatgta
aaaatgaatcttatcagagaggaggacggaaagtctgtatggaaggctacaatatggaaa
gaagaatttgccgccataaatacaaggcaagtccaagaagaactgcatctgtgttctgag
tttgataaacttcaattctttgagaaacacagatcaacactcattaaaagagttaaaaat
gtgaagagcattgcagataaactgtatgagcagaggataattcatgaggaactatattct
gaaatcacatatacaaatttgaccagtcaggacagcatgagaaagatctgttactcggtg
cattcaagtggtgtgtttgcaaaaggtaaattcattgtggttcttcaggaagaagagccc
catctctttgaagaacttgtgcgttcagatgcttaa
DBGET
integrated database retrieval system
